Salmo trutta (river trout): 115174973
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Entry
115174973 CDS
T08542
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115174973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115174973
03021 Transcription machinery [BR:
stru03021
]
115174973
03036 Chromosome and associated proteins [BR:
stru03036
]
115174973
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
ARID
115174973
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115174973
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115174973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
115174973
NCBI-ProteinID:
XP_029589909
Ensembl:
ENSSTUG00000034853
UniProt:
A0A674C710
LinkDB
All DBs
Position
35:27340726..27435209
Genome browser
AA seq
2200 aa
AA seq
DB search
MAAQVATAPTSTGKKRSSLTSSVSQDFKSAKSGVVGGAVLGVGNGTIVHAINVERNHHEL
NPNRARVFPVNNNSSQREKESGDCRSESFSTSNCDMSSGSMETGTLVSHKVKNVGVGDPP
SHHHTPPQQQPFNQFIQHQQRQIHNSQQSIHGESGNRQHGGKENVVLGNQVERNQQQQML
NKSEEEDQPSKTEDRINSRYDHASLGPTNNINPSQSGNSSVSELNSYYGKGRGGPCFDQH
GGQQSPVSGIMHSVQQNNMDQLQQNSHEGYQNNPYNHYPNYRPGYGNSGYGMMSPSRHGN
NMMGPISNSAAANHSRAAMAAASSSGGANIGGFHRFPGQSQQHPSGATPTLNQLLTSPSP
MMRGYGSGYQDYTNPSAQQQQSSMGLTKDLSSQYGSTTHSWGGQERNHPAMSPGNNGQGS
GRSQVPPIDAMAMKRSQLYGMGNNPYSQQQQGGGGSYPGQPYGSPSPHRYPMGMPGRAQM
GVSGMQYPQQQQQMAAQYRQQQGGMGGYCQPQGQPPYSSPPQQQQPAAPTQPPYMQSRPL
PQEEVSQEGSVNRGQSAMTPGKPNHEEMGLSQQDRPSSLPDLSGSIDDLPTGTEVAISSA
VSASGSTSSQGEQSNPAQSPFSPHMSPRLRSGPSPSPVGSPVGSSQSRSGPISPASVPGT
QMAPQTPGNMSDVGSHSTLSQSPMSQERGFPPAMQRNTTVPQQSGQGPAMSPHSSPGGSM
HPQSTYHQQQLQGGPGPSYGPQTGQYGPQGNYPRPPNYGGTPSANYSGPGHGMSNSLGMN
ASSPMHGQGPGQPCGSMPAGRGLGLGASGRPHLGANTNTMAPTSPSMPQPAGQGQGMRLP
LPSVNQDVGLGPGTNAMQGPNAGPNPSAQGRQGMTPMPHHPGMSPRGMASSPGGPYSQQP
GANTSGRMTPQGPQPLYNAPSGLMQMGGEGMACPTDPKRRPPEQYRESNTPGPAAEPPPK
PKKTSPATMTNENIRILYEMGVEPERRVWVDRYLAFMEERGTPVPMLPAVGRKPLDLCRL
YLCVREIGGLAMVNKSKKWRELSTHLNVGTSSSSASSLKKQYIQYLFAYECRVERGEEPP
LEIPGETKKQAKIQPPSPANSGSLQGPPTPQSTGSSSMTEMSEGMKLPTPTTTPHGHMTP
QPGNRNSVGIRVQDPFSEVSDPAFHKRGPMPSGAPYQQVGGSADPSMRMQYDTNKDPYEG
PRKGPGGSDPYRPGQMPSGAMQDMYPRGPPSGVMPGMGMVPGPRSQYPYGPGYDRRPDHV
MGSEGGVPPPGGQNNMVPSSGDPSMYSANRYPHQRPPGHEGYGQQYPHGPMPYGSHQPGM
YPQQGYKRPVGQEGMYGPPAKRHEGEAYDMQQYGGQQPDMHRQYGGGYMGPEHRPMQGQY
PYSYSRDRMGAIQGPQQHGMMSGGPPFPPGASAEGPQANMWHPRTDMGYPGPYPGRQGQG
PPYPVMGRGPGDDPEGRALQDGQWRQSPYPCPSSSSMASRQPPSSYQSNPAMANHIARAP
SPFARPMGGPGPLSPNNGGHYMASLKKAGMPGSMSGSHNGGMTGQSILPLHRDISFPTGS
VEATLPKLKVRRRLTSKETGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVSSFT
LSQLPGFLELIVDYFRRSLISIFGILDEYEVGTEGQKMLLGPITDQEEELSVAELDSQLD
EEQRDSRPEETGPEKTTANGSTEEAVPEEKEEPVEVTLKEMVEGEEKEGAATEQSQPSEP
KPKQASKYDKLPVKVEEDQVEGDQVEGDQELSLPRGFTSGLLHWKAGGGDSTAHIQTHFE
RRGEETNSKPTERKDQVEEKTETTEEEGRRKAVVEKSMTETATMDDMLSAWPGSLSERNG
LPGTQTQSPIFTLLEDEPRCWDEAPLSTAEPWQDALARRCVCISNIVRGLSFIPGNDNDM
SCHPGLVLILGRLVLLHHLHPQRRKTPPSYQREEEQGQACSKDEWWWDCLSALRENTLVT
LANISGQLDLSLYPESICLPILDGLLHWMVCPSAEAQDPFTTAGCSSSLTPQRLVLECLC
KLSIQDNNVDLLLATPPFSRQEKLYATLVHHVGERKSQVCREMAVAVLSNLAQGDPTAAR
AIALQKGSVGILIGFLEDCVAMCQHQQGPHSLLHPAPHPQPPSINMMCRAAKALLAMAKE
NRTELVLYESRLLDISLSSVLSSAVAAIMCEVLFKIGRSS
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacaagtggcaacagccccaacatcaactggtaagaaaaggtcgagtttaact
agcagcgtgagtcaagattttaaatctgccaaatctggagtagttggtggagctgtactt
ggggtaggaaacgggactatcgttcatgctattaatgtagaacgcaatcaccatgaattg
aacccaaacagagctcgagtttttcctgtaaacaacaattcgagtcaacgtgagaaggaa
agtggagattgtagatcggagtctttttcgacttcaaattgtgacatgagttcgggaagc
atggagacgggaacgcttgtcagtcataaagtgaaaaatgttggtgtcggagatcctcca
tcgcatcaccacacacctccacagcaacagccattcaatcaattcattcagcaccaacaa
cgccaaattcacaacagccagcagtcgatacatggagaaagtggaaaccgccaacatgga
ggaaaagagaacgttgttttagggaatcaagtggaacggaatcagcagcaacaaatgcta
aataaaagtgaggaggaggaccaaccgagcaaaacggaggaccggattaacagcaggtac
gaccatgccagtttgggaccaactaataacatcaacccgtcccaaagtgggaacagctca
gtttcggagttaaatagttattatggaaagggaagaggagggccttgctttgatcaacat
ggcggacaacaaagcccagtgtctgggataatgcattcggtacaacagaacaatatggat
caacttcaacaaaactcccacgaaggataccaaaacaacccgtacaatcactacccgaac
taccgacctggctacggtaacagtggatacgggatgatgagtccctctcggcacgggaac
aacatgatgggcccaatcagcaactcggctgctgctaatcatagcagagctgccatggct
gctgcctcttcttctggtggtgctaatattggagggtttcacagatttccagggcaaagt
cagcagcatccgtcgggggctaccccgactctaaaccagttactgacatccccgagccct
atgatgcggggctatggcagtggctatcaagattacactaatccatctgctcaacaacaa
caatcaagcatggggctgactaaagacttgagctcccaatacggttcaacaactcatagt
tggggaggacaagaaagaaatcaccctgccatgagccctggaaacaacggacaaggaagc
ggcagatcacaggtgccaccaatagacgccatggcgatgaagcgctctcagctctacggc
atgggcaacaacccttactcccagcaacagcagggcgggggcggctcctaccctggccaa
ccatacggatcaccttctcctcaccgctacccaatgggaatgcctgggagggctcagatg
ggcgtgagtggaatgcagtatcctcaacagcagcagcagatggcagctcagtataggcag
cagcaggggggcatgggagggtactgccagccacaaggccagcccccgtactccagccct
ccccagcagcagcagcctgcagcccccacacagcccccctacatgcagtcacgtccactg
ccacaggaggaggtgtcacaggagggctctgtcaacaggggccagtctgctatgacccct
gggaagcccaaccatgaggagatgggcctcagccagcaggacagaccctccagtcttcct
gacctgtctgggtctatagatgaccttcccacgggcacagaggtggctatcagctcagcg
gtcagtgcttcggggtccaccagcagccagggcgagcagagtaacccggcccaatcaccc
ttctcaccccacatgtcccctcgcctgcgtagcggcccctccccctccccggtggggtca
cccgtgggttccagccaatcgcgctccggaccgatctcccccgccagcgtcccaggcacc
cagatggccccacagacccctgggaacatgtctgatgtgggttcccattccaccctgagc
cagtcccccatgtctcaggagagagggttcccacctgccatgcagcggaacaccacagtc
ccccagcagtcgggtcagggacccgccatgtcccctcactcgtcccccgggggctccatg
cacccccagagcacctaccaccagcagcagctgcaggggggccccggaccctcgtacgga
ccccagaccggccagtacggcccccaaggtaactaccccaggccccctaactacggcggg
acccccagcgccaactacagcggccccggccatggcatgagcaacagcctgggcatgaat
gccagtagccccatgcacggccagggccctgggcagccctgtggctccatgcccgccggg
cgaggcctgggtctgggggccagcgggcgaccccatctcggtgccaataccaacaccatg
gcccccacctctcccagcatgccgcagcctgccggacagggccagggcatgagactgccc
ctgcccagtgttaaccaggatgtaggtctgggcccaggcaccaacgccatgcaggggcct
aacgctggtcccaacccttctgcacagggcaggcagggaatgacccccatgcctcaccat
ccaggcatgagccccagagggatggcctccagccctggtggcccctacagccagcagcca
ggggccaacacctctgggaggatgaccccacaggggccccaacctctctacaacgcaccc
tcagggctcatgcaaatgggaggagaggggatggcgtgtcccactgaccccaaacggaga
cctccagagcagtacagggagagcaatactcctggtcctgccgccgagcccccacctaaa
cccaagaagaccagcccagccaccatgaccaatgagaatattcgcatcctgtacgagatg
ggcgtggagcccgagaggcgggtgtgggtggaccgttatctggccttcatggaggagagg
ggcacgcccgtacccatgctgccagccgtgggcaggaagcccctggatctgtgccgcctc
tacctgtgtgttcgagaaataggaggcctggccatggtgaacaagagcaagaagtggagg
gagctgtccacccatctcaatgtgggcacgtccagcagctctgccagctctctgaagaag
cagtacatccagtacctgtttgcctatgagtgcagggtggagcggggagaggagccgcca
ctggagatccccggggaaaccaagaaacaggctaagatccagccgccctcaccggccaac
tctggctccctgcagggtccccccaccccccagtctacaggtagcagctccatgactgag
atgtcagaaggcatgaagcttcccactcccaccaccacaccacacggacacatgaccccc
cagccaggcaacaggaacagtgttggtatccgtgtccaggatcccttctcagaggtcagt
gaccctgccttccacaagcgagggcccatgccctctggtgccccctaccagcaggttggc
ggtagtgcagacccctccatgaggatgcagtacgacaccaacaaggacccctatgaaggg
ccccggaaggggccagggggcagtgatccctatagaccaggtcagatgcccagcggtgcc
atgcaggacatgtacccccgcggtcctccctcaggagtcatgccagggatgggtatggtc
cccggcccgcggtcacagtacccctacgggcctggctacgacaggagaccagaccatgtg
atgggttcggaggggggtgtgcctccccctgggggtcagaacaacatggtaccttccagc
ggtgacccaagcatgtactctgccaaccgatacccccatcagcggcctcctggacatgaa
ggttatgggcagcagtaccctcacggccccatgccctatggctctcaccagcctgggatg
tacccacaacagggctataagaggccagtgggacaagaggggatgtacggtcctcctgct
aagcgccatgagggtgaagcctacgacatgcagcagtacggagggcagcagccagacatg
caccgccagtatggagggggctacatggggccagagcacaggcccatgcagggccagtac
ccttactcctacagccgagaccgcatgggagccatccaggggccccaacaacatggcatg
atgagcggaggccctcccttcccccccggagcctctgcagagggcccccaggccaacatg
tggcaccccaggacagacatgggctaccctgggccctaccccggccgacagggccagggg
ccaccttaccctgttatgggccggggtccgggggatgacccagagggaagggccctccag
gacggccaatggcgccagtccccatacccatgcccctcttcctcctccatggcctcccga
cagcccccctcctcctaccagtctaaccctgccatggccaaccacatcgctagagccccc
agccccttcgcccggcccatggggggacccggacccctttcccccaacaacgggggccac
tacatggcctctctgaagaaggcagggatgcccgggtccatgtcaggctcacacaatggg
ggcatgacagggcagagcattctacctctccacagagatatcagcttccccacggggtct
gtggaggccaccctgcccaaactcaaggtccgacgcagacttacttccaaggagaccgga
accccagaggcgtggcgtgtgatgatgtctctgaagtcaggtctgctggctgagagcacg
tgggcgctggacaccatcaacatcctactgtatgacgacagcaccgtgtcctccttcacc
ctgtcacagctgcctggcttcctggagctgatagtggactactttcgccggagtctgatc
tccatatttgggatcctggatgagtacgaggtgggcaccgagggccagaagatgctgctc
ggaccaatcacagaccaggaagaggagctttccgttgcagagcttgacagccagttagac
gaagagcagagggacagcaggccagaagagactgggccagagaagaccacagccaacggc
agcacagaggaggcggtcccagaggagaaggaagagcctgtggaggtgactttgaaagag
atggtagagggggaggaaaaggagggtgccgccactgaacaatcccagccctcagagcca
aagcccaaacaggccagtaagtacgacaagctgcctgtgaaggtggaggaggaccaggtg
gagggggaccaggtggagggggaccaggagctcagtctgcccagggggttcacctctggc
ctgctgcactggaaggctggaggaggggactccacggcccacatccagacacactttgaa
agacgtggcgaggagaccaacagtaagcctacagaaaggaaagatcaggtagaggagaag
acagaaacgacagaggaggaaggaaggaggaaggctgttgtagagaagagcatgactgag
acagccaccatggatgatatgctgagtgcctggccaggctctctgtcagagaggaacggt
cttcccgggacgcagacccagagccctatcttcaccctgctggaggacgagcctcgctgc
tgggacgaggcgcccctctccacggccgaaccctggcaggacgccttggcccgccgctgc
gtttgcatctccaacatcgtccgcggcctctccttcatcccggggaatgacaacgacatg
tcctgccaccctggcctggtgctgatcctggggcggctggtcctgctgcaccacctgcac
ccccagaggaggaagacgccccccagctaccagagagaggaggagcagggccaggcctgc
agcaaggatgagtggtggtgggactgtttgtcagccctcagggagaacactctggtcacc
ctggctaacatctcaggtcaactagacctgtccctctacccagagagcatctgtctgccc
atcctggacgggctactccactggatggtgtgtccctctgccgaggcccaggaccccttc
accacggcgggctgctcctcctccctcaccccccagagactagtgctggagtgcctgtgc
aagctgagcatccaggacaacaacgtggacctgctgctggccacgccgccgttcagccgc
caggagaagctctacgccaccctggtgcaccacgtgggtgagcggaagtcccaagtgtgc
cgggagatggcggtggctgtgctctctaacctggcgcagggggacccaaccgcggcgcgc
gccatcgccctgcagaagggcagcgtggggatactcatcggcttcctggaggactgcgtg
gccatgtgccagcaccagcagggaccccacagcctgttacacccagcaccacacccccaa
ccccccagcattaacatgatgtgcagggccgccaaagctctgctggccatggccaaggag
aaccggacagagttggttctctacgagagcaggctactggatatctccctgtcctctgtg
ctgagctcagccgtggcggccatcatgtgtgaagtactgtttaagattggacgctcctcg
tga
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