Salmo trutta (river trout): 115175045
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Entry
115175045 CDS
T08542
Name
(RefSeq) AF4/FMR2 family member 2-like isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115175045
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115175045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
115175045
NCBI-ProteinID:
XP_029590049
Ensembl:
ENSSTUG00000043367
LinkDB
All DBs
Position
3:complement(39125547..39296204)
Genome browser
AA seq
1342 aa
AA seq
DB search
MDLFEFDFFRDWELEQQCHYEQDRSALKKREWERRTQEVQQDEDLFSSGFNLFGEPYKTE
ATSLSTLGGTNNLNKTNKGDALANRVQNTLGNYDEMKELLTSHSNQSHLVGIPKNSVPQT
PGPSFFTEGAQRTSNRTGTGHNTNSMHPPPSSSSLTSSTRLSGHQSSKKSRSSDWLQGAH
CSSSTSTQEVGGQGVGVPTSSRGKHLSTHEQQQQQPQRHEELFSSQGDAVGHKGDSSSSP
NSSTSRRHGGGQQQAPKAPSAAEHGGYKDSNNHVKSPLEQEPGSHGSSSPVASTSLLPSG
LSTPTFPQGLHVKPSAVQQQKPTAYVRPMDGQDQVPLDSPELKPPLEVGDMGYSNLAFGS
TTTSSKSKLPKLTLTQTGEVSLSSDSSCVEEILREMTHSWPPPLTAIHTPGKAEQTKFPI
PSKESQHLPTGYAGQKRCNVPGNKPATKSVPQKSMLEDDLKISSDEEDTDQQAAEKPKTR
STPLSIPVATSRTTDPGLSSGASGSSSESESSSESDSDSESSSSDSECNGASRTATPEPE
PPSTNKWQLDKWLNKVTPHNKALINTQPERESHGLSSSQPDHSQQAPEGQGPTPGKSKPG
PTAVLAPNDPKERALLSPIREKAKPKTGPKVSEGKGSKVKSPAVVAVEPAPPRRSLGKKQ
PKKVERSSSLEEHTSWSKPINPTISTTPKDKDPPSLLEQPKSRTKSTSGKTAPRKEPRTT
TTTTITPAPPPLAPVLEKKKHRGPSKIIPKSKEFIETESSSSECHSEPEELIKIHNPPCP
GPSSLQTLKAAKDCNSNILTVSSLTSTCSSSISIPDPGAVDLLGDPLFSSVPIVQNKLLS
PLRDFEDIKSLWVKIELSFLSRVPGQDPPEPPSVKVEPREPREPRIKHRRQSPASLQSTP
VEKPPSKAKRKHKMDHCDAVGGSKRLRLEKDSLLLPPCISPIHNHKNISTKDSLRKQPRK
REEKRELLPPLLSPLSDEPPIRQRRTSECSSFSQEGGASSATSTLLLPTLSCSLPHFSSS
SSSSSHKHRSKGESKSFSRSKTSSEEDTHSKPSGSFHGNGQSDSDVWSNPSSLSMDHIEP
RRPKLTFNNTVHNADYCMQEAKKLKHKADALMEKFGKAINYADGALSFIECGNAMERDPL
EAKSPYTMYSETVELIRYAMRLKNFTSHSATVAEKKLAVLCNRCLSLLYLRMFKLKKDHA
VKYSRSLMEYFKKSSQAPSPWGANGKSTGTPSPLSLSPSPVSSVSSSTGPGLAGSCPSGA
SSNVAIPQRIHHMAASHVNITNNILRSYEHWDTAEKLATESQEFFQELDSTMEPLSQHSS
MTELVRYIRQGLHWLRIEAHML
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgagtttgacttctttagggactgggaactggagcaacagtgtcattac
gagcaagaccgcagtgcgctcaagaagagggagtgggagcggcggactcaggaggtgcag
caggacgaagatctcttctcctccgggtttaatctgttcggggagccgtacaagacagaa
gcaaccagtctatccactttgggggggaccaacaacctaaacaagaccaacaaaggtgat
gctctggccaaccgcgtacagaacactctggggaactacgatgagatgaaggagctcctg
accagccactccaaccagagccacctggtggggatccccaagaactctgttccccagacc
cccggccccagcttcttcaccgagggggcccagaggacgagcaacaggacaggcacgggg
cacaataccaactccatgcaccctccgccctcctcttcatccctgaccagctccacccgg
ctgagcggccatcagagctccaagaagtcccgctcctccgactggttgcagggagcccac
tgctccagcagcaccagcacccaagaggtgggggggcagggagtgggggtaccaaccagc
agcagggggaaacacttgtctacccatgagcagcagcagcagcaaccccagagacacgag
gagctgttcagctcacagggcgacgccgtgggccacaagggagactccagcagcagcccc
aactcttccacctccaggaggcatggcggtgggcagcagcaggcccctaaggccccttcg
gcggctgagcatggcggatacaaggacagcaacaatcatgttaagtctcccctggagcag
gagccgggctcccacgggtccagttcccccgtggcctccacctccctgctgcccagtggc
ctttccacgccaaccttcccccagggcctgcacgtcaagcccagcgccgtgcagcagcag
aagcccacggcctacgttcggcccatggacggccaggaccaggtgcccctggactccccg
gagctcaaacctcctctggaggtgggggacatgggctacagcaacctagcctttggcagc
accaccaccagctccaagagcaagctgcccaagctgaccctgacacagactggggaggtc
agcctgtccagtgactccagctgtgtggaagagattctacgggagatgacccactcctgg
cctcctcccctgactgccatccacactccaggcaaggctgagcagacaaagttccctatt
ccctccaaggagtcacaacacttacccacaggatacgctggacaaaagcggtgcaatgtt
cccggtaacaagcctgcaaccaagtctgtaccacagaagtcaatgcttgaggatgacctg
aagatcagcagtgacgaggaggacactgatcaacaggcagcagagaagcccaagaccaga
agtacacctctcagcatccctgtggccacgtctcggaccactgacccgggcctctccagc
ggtgcctcgggcagctccagcgaatcagagagtagctctgagtcagactcagatagtgag
agcagctccagtgacagtgagtgtaacggggcctcccggaccgccaccccagagcctgaa
cctccatcaacaaacaaatggcagctggataagtggttgaacaaagtgaccccacacaac
aaagcacttatcaatacccagccagagagagagagccatgggctcagcagctcccagcct
gaccacagccaacaggcccctgagggccagggcccgaccccagggaagagcaagcctggc
cccaccgccgtgctggccccaaacgaccccaaggaacgggccctcctcagccccataaga
gagaaggccaagcctaagactggaccaaaagtctcagagggcaagggttcaaaggtcaaa
tccccagccgtggtggcggtggagccagccccacccaggcgcagcttggggaagaaacag
ccgaagaaagtggagcgctcgtccagcctggaggaacacacctcctggtccaagcccatc
aaccccaccatcagcactacccccaaggataaggaccctccatccctcctggagcagccc
aagtccaggaccaagagcaccagtgggaagactgcccctaggaaggagcctcgcaccacc
actaccactacaattactccagctcctcctcccctggccccagtcctggaaaagaagaag
cacagggggcccagcaagatcatccccaaatccaaggagttcattgagacagagtcttcg
tcatctgagtgccactctgaaccagaggagctgatcaagatccataaccctccctgtcca
ggacccagcagtctgcagactctcaaagcagccaaggactgcaacagcaatatcctgact
gtcagtagccttaccagcacctgcagctcttccatatccatcccagaccctggggccgtg
gacctcctaggggaccccctcttctcctccgtccccatcgtccagaacaaactgctgtcc
cctctcagggactttgaggacatcaagtcactgtgggtgaagattgagctgagcttcctg
tctagggttccagggcaggacccccctgagcccccttctgtgaaagttgagccccgggaa
ccacgtgaacccagaattaagcacagacgacagtcccccgccagtcttcagtctacccct
gttgagaaaccacctagcaaggccaagaggaaacacaagatggaccattgtgacgctgtc
ggcggaagcaagaggttacggttggagaaagactccttgcttcttcccccatgcatctca
ccgatacacaaccacaagaacattagcacaaaagactctctgaggaaacagcccaggaag
agagaggagaagcgagagctgctgcctcccctgctttctccgctctccgacgaaccccct
atacgccagcgcaggaccagcgagtgttcctccttcagccaggagggcggtgctagcagc
gccaccagcaccttattactacccaccctcagttgctctctgccccacttctcctcctca
tcctcctcttcctcacacaagcaccgcagcaaaggagagagcaaatccttctcacgttcc
aagacaagcagtgaggaagatacccatagcaagccgtctggtagtttccatggcaacggt
cagtcagattctgacgtttggtccaacccgtcatctctgtccatggaccacatcgagcct
agaaggcccaagctaacgttcaataacacagttcacaacgcagattactgcatgcaagaa
gccaagaaactaaagcacaaagcagatgcactgatggagaagtttggcaaagccattaac
tacgctgatggggcgctgtcgttcatcgagtgtggcaacgccatggagcgggatccgctg
gaggccaagtctccatacactatgtactctgagacggttgaactcatcaggtatgccatg
aggttaaagaactttacaagtcactcagcaactgtagccgagaagaaattagctgtgttg
tgcaatcgctgtttatccctcctgtacttgagaatgttcaaattgaagaaggaccatgca
gtaaagtattcccgttcactaatggagtatttcaagaaaagttcccaagcaccttcgcca
tggggagccaatggaaagagcacaggcaccccgtcgcccctgtctctgagtccctcccca
gtcagttcggtgagcagcagtacgggccctggccttgcgggctcctgtccctccggtgcc
tccagcaatgtggccatcccccagcgcatccatcatatggccgctagccacgtcaacatc
accaacaacatcctccgcagctacgagcactgggacacggcagagaagctcgccacagag
agccaagagttctttcaggagctggactcgacgatggaaccgttgagccaacacagcagc
atgacagaactggtgcgctacatacgccaaggactgcactggctacggatagaggctcac
atgttatag
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