Salmo trutta (river trout): 115175132
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Entry
115175132 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 5-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115175132
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115175132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115175132
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115175132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
SET_assoc
Motif
Other DBs
NCBI-GeneID:
115175132
NCBI-ProteinID:
XP_029590201
Ensembl:
ENSSTUG00000048501
LinkDB
All DBs
Position
35:34963051..34978011
Genome browser
AA seq
327 aa
AA seq
DB search
MSGCRIFVGRLNPSAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGK
ELCNERVTIEHARVRLRGGRGRGGDRGGGGGGGGGGGGGGGRFPDRYGRGSQDSRRTNQP
SGQPSARNPPPMRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFA
SYSDLKNAVEKLSGKEINGRKIKLIEAAKKRGSRSRSRSESSSRSRSRNRSPSRSRTPRR
SRSHSPKRDYNRSRSRSHSGSPAPRGAAPGSPPPRAKETSSTSSKRPSKPSKSASPHSPP
PAQRAPSRSRSRSRSRGSRSPSTDSRH
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgccgcatatttgtcggccggttgaacccgtccgccagagagaaggacgtg
gagagattcttcaaaggatacggtcgcatccgagacatcgacctgaagagaggctttggt
tttgtggagtttgatgatcccagggatgctgaggatgccgtttatgagctggacggcaag
gagctctgcaacgagagggtaaccattgagcacgcccgtgtgcgcctgcgtggtggccga
ggacgcggtggtgacagaggaggaggaggtggtggtggtggcggaggaggagggggtgga
ggccgcttccccgatcgctacggccgtggctcccaggatagtcggaggaccaaccaacca
agtggacagccgtcagctaggaaccctcctccgatgcgtacggagaaccgtctcatcgtg
gagaacctgtcatctcgcgtcagctggcaggacctgaaagatttcatgagacaggcgggg
gaagtaacgtttgcagacgcccaccgccccaagctcaacgaaggggtggttgagttcgct
tcttacagcgatctgaaaaacgctgttgagaagctgtctggcaaggagatcaatgggagg
aaaatcaagctgattgaggcagctaagaagaggggttccaggagtcgttcccgctcagag
agctcctctcgttcccgttctcgtaaccgttccccgtcccgctccaggacaccccgtcgt
tccaggtcccactcccccaagagagactacaaccgctctcgttctcggtcccacagcggc
tccccagctccccgtggtgccgcccccggctccccaccgcccagggccaaagagacctct
tccacctcctccaaacggccctccaagcccagcaagtctgcctcccctcactcccctccc
cctgcacagcgtgcaccttccaggtctcggtctaggtctaggtctcgtggctctcgttcc
ccgtccacagacagccgccactga
DBGET
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