Salmo trutta (river trout): 115175193
Help
Entry
115175193 CDS
T08542
Name
(RefSeq) polycomb protein SCMH1-like isoform X1
KO
K11461
polycomb protein SCMH1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115175193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115175193
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
115175193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Caulimovir_coat_dom
Motif
Other DBs
NCBI-GeneID:
115175193
NCBI-ProteinID:
XP_029590304
Ensembl:
ENSSTUG00000045433
LinkDB
All DBs
Position
3:41519165..41568865
Genome browser
AA seq
725 aa
AA seq
DB search
MKKPVPQKAIEWKDGRRIKHARSGRPSRVPSQYQGGHFSWDKYLKETGASAAPAHCFRQG
ATPPVNEFKAGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEI
QPIGNCEKNTGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPARIFHKQEPPVPEQNSFQV
GMKLEAVDRKNPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCSLTG
DNLQPPGTKAVQPKTLGCLSDGSEGTAMHPMPGQPPGQRGRKPGCRKAKLTGPWGQKGAG
VGPQAPPPGKGLEPIKVPKKRGPKPGNKLGWAKREGWLEGAMAGPGRPVSRPRGRLPANW
AQRMALQEGQVESVKIPKKRGPKPGSKRKQRVVSNPVPVSPNSSMPEPDTSTVPLDNATI
PSTALHAATVCVYLNKYGKVGPHLDGRRVQQLPDHFGPGRASSVLQQCVQACVDCAHNQS
SVFSCLKPGHGGEVISAHFDQQHHTLTLPTVNNVTYILHFLEKLCHNLYCDPLFGSQPIP
RGGLHYNSYAYPERRSFREGLTTGPGRGSKRFLQESYYSPLPHKLGGGGCLSSEGEPFLM
ENGVGGSEHLKKSPLSPGSTGQPLGLRFPTKLLHLNSSGSERFRESPRPSGQDPNLWTVE
DVMQFIRDIDPLLAPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTFHIDRFK
HGRPY
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagccagtgccacaaaaagctattgagtggaaagatggcaggcggatcaagcat
gcccgaagtggtcgtccctcccgggtcccatcgcagtaccaaggagggcacttcagttgg
gacaaatacctgaaggaaacaggtgctagtgctgcacctgcccactgcttcagacagggt
gcaactcctccagtgaatgagttcaaggcgggcatgaagctggaggcgcaggaccctcgg
aatacaacgtcaacctgtattgctacagtggtgggcctgacgggatcgcgtctgcgtctg
cgccttgacggctccgacaataagaacgacttctggcgcctggtggactcgtctgaaatc
cagcctatcggcaactgcgagaagaacacgggcatgctgcagccgccattgggcttccgt
ctgaacgcatcctcctggcccatgttccttctaaaaacactcaatggagccgaaatggcc
ccagcacgcatctttcacaagcaggagcccccggtcccagagcagaactccttccaggtg
ggcatgaagctggaggcagtggaccgcaagaacccccacttcatctgcccggccacggtg
ggggcgttgcgtggcgtggaggtgctcgtcaccttcgatggctggcggggtgctttcgac
tactactgccgctacgactcccgggacatcttccccgtgggctggtgctctctcaccggg
gacaacctgcagccgcccggcaccaaagcagtgcaacccaagaccctcggttgcctttca
gacggtagcgagggaacagccatgcaccccatgccaggacagccgcctggccaacgggga
cgcaagccaggctgcaggaaagccaagctgacagggccctggggccagaagggtgccgga
gtaggaccacaggcccccccgcccggaaagggactggagcctatcaaggttcccaagaag
agaggccccaaaccggggaataagttgggctgggcgaagagagaaggctggctggagggt
gccatggcaggcccagggcgacctgtgtcccggcccagagggaggctgccagccaactgg
gcccagaggatggccctgcaggagggacaagtggagtctgtcaagatccccaaaaagaga
gggcccaagcccggcagcaagagaaaacagcgggtggtgtccaaccccgtgcccgtttcc
cccaacagcagtatgccagagccagacaccagcacggtgcccctggacaacgccaccatc
cccagcaccgccttgcatgctgccacagtgtgtgtatacctgaacaagtatgggaaggtg
ggaccccacttggatgggcggcgggtgcagcagctgcccgaccactttggcccaggccgg
gcttcctcggtgctacagcagtgtgtccaggcctgtgtggactgtgcccacaaccagagc
tctgtcttctcctgcctcaagccaggtcacggaggagaggtcatatcagcccactttgac
cagcagcaccataccctcaccctgcccacggtcaacaacgtcacatacatcctgcacttc
ctggagaaactctgtcacaacctctactgtgaccctctgtttgggagccagcccatcccc
agagggggcctgcattacaacagctacgcctacccagaaaggagaagttttagggagggc
ctcacgacgggtccaggaagaggctccaagcggttccttcaagaatcctactacagcccc
ctcccccacaagctggggggagggggctgcctctcctcagaaggtgagcccttcctcatg
gagaatggtgtaggggggtcggagcacttaaagaagagccccctgtccccgggctcgaca
gggcagcctctgggcctgcggttccccaccaagttgctacatctcaactcttcaggctct
gagcgtttcagagagagcccccggcccagtggccaggaccccaacctgtggacggtggag
gacgtcatgcagttcatcagagacatagaccccctactggccccccacgcagatctcttc
agaaaacacgagattgatggcaaagccctcctgttactacgcagcgacatgatgatgaaa
tacatgggcttgaagctcgggcctgccctcaaactcacattccacatcgacaggttcaaa
catggacgcccttattga
DBGET
integrated database retrieval system
