KEGG   Salmo trutta (river trout): 115175265
Entry
115175265         CDS       T08542                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
stru  Salmo trutta (river trout)
Pathway
stru03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115175265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stru03021]
    115175265
   03036 Chromosome and associated proteins [BR:stru03036]
    115175265
Transcription machinery [BR:stru03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115175265
   Coactivators
    SAGA/TFTC/STAGA complex
     115175265
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     115175265
    STAGA complex
     115175265
    TFTC complex
     115175265
    SAGA complex
     115175265
    SLIK complex
     115175265
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10
Other DBs
NCBI-GeneID: 115175265
NCBI-ProteinID: XP_029590331
Ensembl: ENSSTUG00000045472
UniProt: A0A674E1J1
LinkDB
Position
3:complement(41714801..41721523)
AA seq 162 aa
MTQYQPQSNHSNFFTVKAEASSTPPLATSMANSNTAAPGKVMGTPGPAGRISPEGSQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIDSVVTAACQLARHRKSNTLEVKDVQLH
LERQWNMWIPGYGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgacccagtaccaaccacagtccaaccactccaacttcttcaccgtgaaagccgaggcc
tcatcaacaccacctctcgccaccagcatggccaatagcaacaccgccgccccagggaag
gtgatgggcacacctggccctgccggcagaatcagcccagaaggaagtcaggtgttgagt
aaaaagaagctgcaggacctcgtaagagagattgaccccaatgagcagctcgatgaggat
gtggaggagatgctgctgcagattgcagatgacttcattgacagtgtggtgacggctgcc
tgtcaactggcccgccatcgcaaatccaacaccttagaagtgaaggacgttcagctacac
ctggagcgccaatggaacatgtggattcctggctatggttcagatgagattcggccgtat
aagaaggcttgtacgacagaggcgcacaaacagagaatggcattgatccgcaaaacaacc
aaaaagtag

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