Salmo trutta (river trout): 115175315
Help
Entry
115175315 CDS
T08542
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03022
Basal transcription factors
stru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115175315 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
115175315 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115175315 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
stru03400
]
115175315 (gtf2h4)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115175315 (gtf2h4)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115175315 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
115175315
NCBI-ProteinID:
XP_029590349
Ensembl:
ENSSTUG00000043659
LinkDB
All DBs
Position
36:complement(7613798..7624438)
Genome browser
AA seq
462 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPEILDRLYNHPATCLAVYRELPPLAKNYVMRMLFLDQPLP
QAAVALWVKKDSEKDHDQCVSVLSGLRLWHSQQLQGGLQGNILNPVFKDNLRIALLGGGK
SWADQGDSLGPDRHARDVESLDKYALERWEVVLHFMVGCPSAAVSQDLSQLLIQAGLMRT
EAGDAPCITSAGFQFLLLDTASQLWYFTLQYLNTAQTRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLSAGVSANSSSTAMGATPG
TGDSGFIVVETNYRLYAYTNSELQIALVALFSECLYRFPNVVVAQVTRESVQQAIANGIT
AQQILHFLRTRAHPVMLKQNPVLPPTITDQIRLWELERDRLQFSEGVLYNQFLSQADFEV
LRDRAQGLGCLVWQNVAHRVIVVSPQGHGEVKRFWKRQKSHT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgcgttcagttacaatgcaagaacctccatgagtatttgaaagagttgagc
cctgagatcttagaccgcttgtacaatcatccggccacatgtctggctgtttacagggag
ctccccccattggccaagaattatgtaatgcgaatgctgtttctagaccaaccccttcct
caggctgcggtggctctttgggtgaaaaaagacagtgagaaggatcatgatcagtgtgtc
tctgtgctgtctggtctcagactatggcacagccagcagctacagggaggtctgcaggga
aacattctgaaccccgtattcaaagacaacctgagaatagcattattaggagggggtaag
tcgtgggcagaccagggtgacagtcttggtcctgacagacatgcccgtgacgtggagagt
ctggataagtatgccttggagcgctgggaggtggttctccacttcatggttggctgtccc
agtgctgcagtcagccaggacctgtcccagctcctcattcaggctggcctcatgagaact
gaggctggagatgctccctgtatcacctcagctggtttccagttcctcctcctggacaca
gcctctcagctctggtacttcaccctacagtacctcaacacggcacagactcgtggaatg
gacctggtggagattctgtccttcttgttccagctcagtttctcgacactaggcagggac
tactcagtggaggggatgagtgaatctctgctcactttcctacagcacctgagagagttt
ggcctcgtcttccagagaaagaggaagtctagaaggtactaccctaccaggctggccatc
accctgtctgctggcgtctccgccaactcttcctccaccgctatgggcgctaccccaggg
actggagattcaggtttcatcgtagtggaaaccaactatcgactctatgcttatactaac
tctgagctgcagatcgctttggtggctctgtttagtgagtgtctctatcgcttccctaac
gtggtggtcgcccaggttaccagggagtcagtacagcaggccatcgctaacggcatcacc
gcacaacagattctccactttctaaggaccagagcacatcctgtcatgctcaaacagaac
ccagtgctgccccccaccatcacagaccagatcagactatgggagctggagagagatcga
ctacagttctctgagggagtgctgtataaccagttcctctcccaggctgacttcgaggtg
ttgcgggacagagcgcagggcctgggctgtctggtgtggcagaacgtggctcacagggtg
attgtggtttcaccgcagggacacggcgaagtcaagaggttctggaaacgacagaagagt
cacacttga
DBGET
integrated database retrieval system
