Salmo trutta (river trout): 115175332
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Entry
115175332 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115175332
04121 Ubiquitin system [BR:
stru04121
]
115175332
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115175332
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115175332
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115175332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
DUF7830
zf-RING_2
zf-B_box_Trim66
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115175332
NCBI-ProteinID:
XP_029590373
LinkDB
All DBs
Position
36:8233710..8276529
Genome browser
AA seq
825 aa
AA seq
DB search
MASFSESDLQTCPLCKELCGSSSAPISCNSSTSSSSSHSSSSSSRRLHVLPCLHAFCRQC
LEGKRSHGDPLKLSCPTCNQKVSISEAGVDSLPSSNFLLSNLLDVEQLQLGQNKNGHQGD
SGCSIPRFHRAHSGLRPNRLGGPQCSSCDEGNLASFHCLDCQEYLCDNCVRAHQRVRLTK
DHFIERLAESLQHASRGKSSPIAGGGRGVGLSLTQPFQSNSSLLPLFQDRMSFCQHHDNK
VFLFFCETCSVPVCRECSVGRHMGHSLVYLQDAVQDSRDIIIQLLADAQQGRQAVQLSME
KVQAIAEQVDIKAKVVQTEVKNMVLRHLKALEDRESQLLWKVEKIHQLKAKSLYLQVEKL
HQNLTKLDSTIAAVTQVLDEGCHLDVLLARERMLTQIQELKSLRGLLQPQEDDRLLFTPP
DQALYIAIQSMGLISSGAFAPVTKAHGEGLKTALCGKTTSFTVIGYDHDREPCLSGGDAV
SAVVMAAADGNLSAAEVCDNQNGSYTVSYLPKTEGEDLVSVLVCNQHIMGSPFKVLVKSG
RRYGALGSPVSAFGSEGEGDGQLCRPWGISVDKEGYVVVADRSNNRVQIFKPCGAFHHKF
GSLGSRPGQFDRPAGVACDSQQQIIVTDKDNHRVQVFTFDGQFMLKFGEKGTKNGQFNYP
WDVAVNSAGKILVSDTRNHRIQLFGPDGSFINKYGFEGALWKHFDSPRGVAFNHEDHLVV
TDFNNHRLLVIRPDCQSARFLGSEGTANGKFLRPQGIAVDQENRIIVADSRNHRVQVFEP
NGNFLCKFGTHGSGFGQMDRPSGVAVTPDGVIVVVDFGNNRILKF
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattctcagagtccgacctgcagacctgtcctctctgcaaggagctctgtggc
tcctcctccgctcccatctcttgcaactcctccacttcctcctcctcctctcactcgtcc
tcctcctcctcccggcgcctccatgtcctcccctgcctgcacgccttctgcaggcagtgt
ctggagggcaagcgcagtcatggggaccctctcaaactcagctgccccacctgcaaccag
aaggtctccatctccgaggccggagtggactctctcccttcctccaacttcctcttgagt
aaccttctggacgtggagcagctccaactcggccaaaataagaacggtcaccagggggac
agcgggtgctccatacccagattccaccgcgcccatagcgggctccgcccgaaccgtctg
ggagggccccagtgcagctcctgtgacgaggggaacctggccagcttccactgtctggac
tgccaggagtacctttgtgataactgcgtccgagcccatcagagggtccgcttgaccaag
gaccacttcatcgagaggctggcagagagcctgcagcatgcaagccgaggcaagtccagc
cccatcgcaggtggaggaaggggggtagggttgtccctgacccagcccttccagtccaac
tcctccctgctgcctttgttccaggataggatgagcttctgtcagcaccatgacaacaag
gtgtttctgtttttctgtgagacgtgctctgtgcctgtctgtagggagtgtagtgtgggc
agacacatgggccacagcttggtctatctacaggacgctgtccaggactccagagacatc
atcatccagctactggccgatgcacagcaaggaagacaggctgtacagttgagtatggag
aaggtccaggccatagcagagcaggtagacatcaaggccaaggtggttcagacagaggtg
aagaacatggtcctcagacacctgaaagccctggaggacagagagagtcagctactctgg
aaggttgagaagatccaccagctgaaagccaagtccctgtacctacaggtagagaagctg
catcagaacctgaccaagctggacagcaccatcgcagccgtcactcaggtgctggacgag
ggttgtcacctggacgtgctgctggccagagagcgcatgctgacccagatccaggagctg
aagtctctcagaggcctgctgcaaccacaggaggacgatcgtttattgtttacccctcca
gaccaggccctgtacatagccatccagtccatggggttaatcagtagcggggcgttcgct
cccgtcaccaaagctcacggcgagggcctaaagaccgcactctgtggcaagaccacctcc
ttcaccgtaattggctacgaccacgacagggagccctgcctctcgggcggtgacgcagtg
tcagcggtggtgatggcagcggcggatggtaacctgtcggccgcggaggtgtgtgacaac
cagaacgggtcgtacacggtcagctacttgcccaagactgaaggagaagatttggtgtca
gttctggtctgtaaccagcacatcatgggcagccccttcaaggtactggtgaagtctggg
cgacgctacggggctctgggttcaccggtgtctgcgtttggcagtgaaggggagggtgac
ggtcagctgtgtcgcccctggggcatcagtgtggataaagagggatacgtggtggtggcc
gaccgcagtaacaaccgcgtacagatcttcaagccgtgcggtgccttccaccacaagttc
ggctctctgggctctcgccccggtcagtttgatcgtccagcgggcgtggcgtgcgacagc
caacagcagatcatcgtaacggacaaagacaaccaccgtgtgcaggtgttcacctttgac
ggacagtttatgctcaagttcggcgagaagggcactaagaacggtcagttcaactacccc
tgggatgtggcagtgaactctgcggggaagatcttggtctctgacaccaggaaccaccgc
atccagctctttggccctgatggctcgttcatcaacaagtacggctttgagggcgccctg
tggaaacactttgactcgccgcgtggcgtcgccttcaaccatgaggaccacctggtcgtc
accgacttcaacaaccaccgtctgctggtgattcggccagattgccagtctgcccggttc
ctgggctccgagggtaccgctaacgggaagttcctgcgtccccagggcatagcggtggac
caggagaaccggatcatcgttgccgactcgaggaaccaccgggtgcaggtattcgagccc
aacgggaacttcttatgcaaatttggcacccatggcagtggcttcggacagatggaccgc
ccctccggtgttgcagtgacacctgacggagtcatcgtggtcgtcgacttcggaaacaac
cgcatcctcaagttctaa
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integrated database retrieval system
