Salmo trutta (river trout): 115175344
Help
Entry
115175344 CDS
T08542
Name
(RefSeq) transcription factor HIVEP3-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115175344
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115175344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-met
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
115175344
NCBI-ProteinID:
XP_029590419
Ensembl:
ENSSTUG00000045938
LinkDB
All DBs
Position
3:42219988..42312360
Genome browser
AA seq
1963 aa
AA seq
DB search
MEAEPSHPADGERSGRQQQPLSAGAAESPTGSRPQQPPSNPRPVHGGLGRLHHRKPKRSD
LLLRLQHQHKTQAAAWQHSTDTSGPSGGSIPSTSSLQSSSTQGHNTHGVQSQPNQEAPEG
SPSKRGERKLQKPGRYVCTYCGRPCAKPSVLQKHIRSHTGERPYPCVPCGFSFKTKSNLY
KHRKSHAHRIKAGLASSRDELSLSGPAMSAPGEDPEEPTEGESTDSEEESGQYRKEKLGK
QKSSSSLALLGQEEGQRSDNSQAVKQRLAMRLSERKRGPMASPEDPPSSSTSSSLGPSSK
GSQESGYFSLSRSTEMSRADSQVSPPTAKTYAEIILGKYGRLGGQQRGPHQQHAHSSSPG
MEEKSSMPFSVPKTQVIEHITKLITINEAVVDTSEIDSVKPRRSLLSRKSSLELPKFSCP
KDPYMFEPKGESPGPSMAGQSFFPHVQDVDPSGVQESSSSVPLLRSHSTPTSAGPGNHST
TSPWGFCRLSHSFDEQQAVVAEMRVGRQHHLLRRQPAIEVPLGAELSLEEAGPSYAATES
SLTRKQQQQQRKGPRLYECKACGVRCKQRESYEAHRGLCTGQPIKELERGEVDGACRDDR
PQMMHYKFRALAMAVRKRRKEESLEEDPPSPEPTAVVTCSPATTTAVPSLVEQSEAFSGA
LSQTEQQQQDRKGISVIQHTSSFEKQESISMESQESIELRESQSTLQKQPQPKSSPSMSR
LVRQHNIQVPEILVTVEPDADMVPVSPTATTSLSKEPESVVEEFQWPQRSQSMAQLPAEK
LPPKKKRLRLAEAAAQSSGESSFESVSLGARSPSQESNISRSPSRSASFEDMGGKPAEPS
PWGSSSTQGSHMLTVPSGLHQQYQPQREMRRSASEQAPASQQHTDEVVETRSKSFDYGSL
SPQRSASAWRERRKCLLVKHATLGEPDHEEGAMASHSGRPGSPKPGPSYTSHPALHPAEA
STSRLSPEAIGKTVQLFHQPRIPPFPMQPTGHDRFPLGQIAQLHPVTTAISDVLSTHIIH
RAFLHTHPSPPTIQVHPGQLHMAECLGLPLHPFSALLSLQYPTGADENVYFPVSPGLTIQ
VPTQPPIPPTVVLPSPSPQSLVPLPCLHPPPVIATCLAQLMPVVSLVVPVRLQTHMTTYA
SALYTTLSQILASARSQEPICCMAMVIMGQLEQDKLQRSYLKIPTPDFKSYLPLSLPLEL
GSVSREGCGPLGAVGSKRMLSPAASLELSTEAQRQQKRVKEEEVEEEKVGEEEENKGTGR
KLEAGEDEEKEPKRAQIGLVTVKVEEEEKVRDPEGHREEGEMQGKAEPKKEKGREENEGQ
GVSASFVPQSPERAKAPSYTSLHTTTSVSWCYLNYVKPNPSAQRESQTSVYTSWSVSVHN
PNLPGLSTKLALSLLSSKQKHSLETYTMATALTPATGKVVSASSRKTYISEVHAIPPSTP
VEVKEPPQQPEKEEKGKREVQGPSTSKQSEPLRVQIFEGGYKSNEEYVYVRGRGRGKYVC
GECGIRCKKPSMLRKHIRTHTDLRPYICKHCNFAFKTKGNLTKHMKSKAHGKKCQSMGTS
GSSLDEPETEEAGGIEEHLSGFEDQDEHQCSDVDDSEEDDDEEESSSHDEPPSSCSSDRS
LSTRGHSSSGRRSQQGTPDPSAPEPQLDPSPCPSQELSPTRRLWHSGHASSPESRRALFS
RRGWDTSLRAFSPSSESSPIQSLSPRRELDSHNRHLSPSPKRGPSPNRALSPLYPMRPLS
PLRPMSPSQYRMLWAPASPSPLGVQHRPCSSPSRLPWDSDRIQVGSMERIGTPSEGQIGP
EPCLSFPPAFRLSPSDSPKAQSQSMDRIFSHLPLHSQQARVTYLMIPIGGIQMVQARPHS
HPTTPTSASSPPMERLLLGQTRREAPWCRTPRTQGLRTPGDHWSDSQEVVGASQSGLCIP
SLTPPIRSKPSTSQQGRIDPGMINTKQYDSSSHSHRSEAETRE
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcccagccatcctgctgatggtgagcgatccggaaggcaacagcagcct
ctgtctgctggggccgctgagtcccccacagggtcccgtccacagcagccgccatccaac
ccccgccccgtccacggtggcctgggacgcctccaccaccgcaagcccaagcgtagcgac
ctgctcctcaggcttcagcatcagcacaagacccaagcagcagcatggcagcactcaaca
gacacctcaggtccttcaggaggcagcatcccctccacctcatccctacaatcctcctct
acccaaggccataacactcatggggtccagtcccagcccaatcaggaagccccagagggc
agcccatctaaaagaggtgagaggaagctccagaaaccggggaggtatgtgtgcacttac
tgcggccgtccatgtgccaaacccagcgttctccagaaacacatccgctctcacacaggg
gagaggccttacccctgcgtcccctgtggcttctccttcaagaccaagagtaacctgtac
aagcaccgcaagtcccacgcccaccgaatcaaggcaggcctggcgtccagccgggacgag
ctgagcctgagcggacctgcgatgagcgccccgggagaggatcccgaggagcctacagag
ggggagagtacagactctgaggaggagtcgggtcagtacaggaaggagaagttgggcaag
cagaagagtagcagcagtttggcactgttagggcaagaggagggccagaggtctgacaac
tcccaggccgtgaagcagagactggccatgaggctgagtgagaggaagcgtggccccatg
gcctccccagaagaccctccctcttcctccacctcctcttcactgggccccagcagtaaa
ggcagccaagagtcaggctacttctccctttcgaggagcactgagatgagccgagctgac
tcccaggtgagccctcccaccgccaaaacctatgccgagatcattctgggcaagtatgga
cggcttggagggcagcagcgcggtccccatcagcagcacgcccactcttcttcaccaggg
atggaggagaagagtagcatgcccttcagcgtgcccaagacgcaggtcatcgagcacatc
accaaactcatcaccatcaacgaggcagtggtggacaccagcgagattgacagcgtcaag
cccaggcgctccttgctctccaggaagagtagtctggagttacccaagttctcctgcccc
aaagacccctatatgtttgagcctaagggagaaagcccaggccccagtatggcaggccaa
tcattctttccccatgtccaagacgtggacccatcgggggtccaggagtcttcctcttca
gtgcctctgctgagaagccactccacgcccacctcagcaggcccgggaaaccactccacc
acctctccctggggcttctgtcgtctgagccactcctttgatgagcagcaggctgtggtg
gccgagatgagggtgggcaggcagcaccatttgctgaggcgccagcccgccatcgaggtg
cccctcggggctgaactcagcctggaggaggctggcccctcctacgcagcaacagaaagc
agcctaaccaggaagcagcaacagcagcaacgcaaaggtccaaggctctatgagtgcaag
gcctgcggagtccgctgtaaacaaagggagagttacgaggcccacaggggtctttgcaca
ggccagccaataaaggagctggagagaggagaggtggatggggcgtgccgggatgaccgt
ccccagatgatgcactataaattccgggcactggccatggcagtgaggaagaggaggaaa
gaggagagtctggaggaggatcctcccagccccgagcctacagctgttgtgacctgcagc
cccgcaaccaccactgcagtgccaagcctggtggagcagagtgaggccttctcaggtgct
ctctcacagactgagcagcagcagcaagacaggaagggtatctctgtcatccagcacacc
agctccttcgagaagcaggaaagtatatccatggagagccaggagtctatagagctcaga
gagagccagtcaacactgcaaaaacagccgcagccaaaatcatcgccctccatgtcccgc
ctggtccgccagcacaatatccaagtgccagagatcctagtgacggtggaacctgacgct
gatatggtgccagtgtcgcccacggcgacgacatccttgtccaaggagccagagagtgtg
gtagaggagttccagtggcctcagcgcagccagagtatggctcagctccccgccgagaag
ctgccaccaaagaagaagcgtctccgtctagccgaggctgctgcccagtcttccggggag
tccagctttgagtcggtatcgctgggggcccggagccccagccaggagagcaacatttcc
cgctcgcccagccgatctgcctcctttgaagacatggggggaaaacctgctgagccttcc
ccctggggctccagcagcacccagggctcccacatgctaaccgtgccctcgggcctccac
caacaataccaaccccaaagagagatgcggcgctcagcctcggagcaggcccctgccagc
caacagcatacggacgaggttgtggagacaaggagcaaatcctttgactacgggtcccta
tccccgcagcggtctgcatcagcctggagggaaaggaggaagtgcctacttgtgaagcac
gccaccctgggcgagccagaccacgaggaaggggccatggccagccactcgggccgacca
gggagccccaagccaggcccgtcctacaccagccaccctgccctccacccagctgaagcc
agcacctcgaggctcagcccggaggccatagggaagaccgtacagctgttccaccagccc
cggatacccccattccccatgcaaccaactgggcatgatcggttccctcttggccagata
gcccagctccacccggtcaccactgccatctcagatgtcctctccacccacatcatccac
agagccttcttacacacacacccttctcctccaaccatacaagtccacccagggcagctt
cacatggcagaatgcttaggcctgcccctccatcctttctcagctctgctctccctgcag
taccccaccggggctgacgagaatgtgtacttccccgtttcccctgggctcaccatccaa
gtccccacacagccccccataccccccactgtggttctcccttccccatctcctcagtcc
ttagtccccctaccttgcctccatcccccgcctgtcatcgcaacgtgcctggcgcagctg
atgccagtcgtgtcactggtggtgccagtgcgcctccagacccacatgaccacctatgcc
agtgccctgtacaccaccctatctcagatcttggcgtcagcccgctcccaggagcccatc
tgctgcatggccatggttatcatgggccagctggagcaggacaagctgcagaggtcctat
ctaaagatccccaccccggacttcaagagctacctgcccctgtctctgcccctggagctg
ggctctgtgtccagggagggctgcgggccactgggggctgtagggagcaaacgcatgctc
tcccctgcagccagtctggagcttagcacagaggcccagcgtcagcagaaacgagtgaag
gaggaagaggtggaggaagagaaggtgggagaggaagaggaaaataagggtactgggaga
aaactggaagcaggggaagatgaagagaaagagccgaaaagggcacagataggattagtt
actgtgaaagtcgaggaggaagagaaggtacgggacccagaggggcacagggaagagggg
gagatgcaagggaaggctgaacctaagaaagaaaaggggagggaggagaatgagggccag
ggagtgagtgcttcctttgtaccccagagtccagagcgagccaaagccccctcgtatacc
agcctccacacaaccacctcagtcagctggtgctacttgaactacgtgaagcccaacccg
tctgcccagagggagtcacaaacctccgtttacacctcctggagcgtcagcgtgcacaac
cccaacctgccaggcctgtccaccaagctggccctgtccctgctgagctccaagcagaag
cacagcttggagacctacaccatggccacagctctaacccctgcgacaggcaaggtggtc
tctgccagcagcagaaagacctacatttcagaggtacatgctatcccacccagcacccct
gtcgaagtgaaggagccaccacagcagcctgagaaggaggagaaggggaagagagaagtg
caagggccctccacctccaaacagagcgaacctctccgcgtccaaatcttcgagggcggg
tacaagtctaatgaggagtatgtgtatgtgcggggtcgcggcagaggaaagtatgtctgc
ggcgagtgcgggatccgctgtaagaagcccagcatgctaaggaagcacattcgaacacac
acggatctccggccctacatctgcaaacactgcaacttcgccttcaaaaccaaagggaac
cttaccaagcacatgaagtccaaggctcatgggaagaagtgtcagtcaatgggaacgtct
gggtcttcactggacgagccagagaccgaggaagcaggaggtattgaagagcatttgtct
gggttcgaggaccaggatgagcaccagtgctctgacgtggatgattcagaggaggacgat
gatgaggaagagtcctcatctcatgacgagccgccctcatcctgctcctccgaccgcagt
ctgtcaacaagggggcattccagcagcggaagacggtcccagcagggcacgcctgacccc
tcagccccagaaccccagctagatcccagcccctgtcccagccaggagctctctcccacc
cgtagactgtggcacagcgggcatgcttcctctccagaaagccggagggcactgttctcc
cgccggggctgggacacctccctcagggccttctcccctagcagtgagagctctcccatc
caaagcctttcccccagacgggagctggactcccacaaccgacacctctcgccctccccc
aagagaggaccatcccccaacagagctctatcccccctgtaccccatgcggcctctctcc
cctctccggccgatgtcccctagccagtatcggatgttgtgggctcctgcctctccctcg
cccctgggggtgcagcatagaccttgcagctcacccagtcgtttgccatgggacagcgat
cgcatacaggtgggttcaatggagaggataggaacaccaagtgaagggcagattggtcca
gagccctgcctgtcattccccccagctttccgtctgtcccctagtgacagccctaaagcc
cagtcccagtccatggaccgcatcttcagccacctgcctctgcactcccagcaggccagg
gtaacctacctgatgattcccattgggggcattcagatggtgcaggctcgtccccactcc
caccccactacccccacctcggcctcctctcccccgatggagaggcttctactgggccag
accaggagggaagccccctggtgcaggacccccagaactcaagggctcagaactcctggg
gaccactggtcagacagccaggaagtagtaggagctagccaatcagggctgtgcattccc
agtttaaccccacccatacgttccaaaccctccacctcgcagcagggtaggatcgaccca
gggatgataaacacaaagcaatatgacagctcctcccactcacacaggtctgaggcagag
accagagaatga
DBGET
integrated database retrieval system
