Salmo trutta (river trout): 115175362
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Entry
115175362 CDS
T08542
Name
(RefSeq) sorting nexin-13-like isoform X1
KO
K17925
sorting nexin-13
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115175362
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115175362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
115175362
NCBI-ProteinID:
XP_029590440
Ensembl:
ENSSTUG00000044771
LinkDB
All DBs
Position
36:complement(9302262..9365388)
Genome browser
AA seq
1011 aa
AA seq
DB search
MGDLVSVAFLPGAGSRAWDYINLYPCLLCDPAGALPIWREASLSVWGWGGLGVVLFLITF
GPFAVFYLAFYIFCFVGGGFAVTLLFGKTNSERHLERCEHSYLPATQTGILKTLDEMRLE
PKPIQIDRRLTGSNYIDEPLQQVIQFALRDYIQYWYYTLSEDDSFLLEIRQTVQNALVQF
STRSKEVDWQPYLTTRLVDDFATHLRVFRKAQDRLEDSKQRDLSEEMVESFFEAEVEMER
NICRDVVCTSLKDEEGFLRDLCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLVNQL
SDPDYINQFVIWMIRDSSCNYEAFMNILKLTDRVSELEAVKDKALEELQYLRSLDTAGDD
INVIKNQINSLMFVKKVCETRIQRLQSGKEVDALKLATNLGKLCIIPLEHILVHNIALQF
FMDYMLGAGAQAELFFWLTVEGYRVTAQQQLEVMEGWQKDGKKGGDTTGLLKAAALGVYE
QYLSDKASPRVQVDEASVLKLGEKLQKDSDPTPEIFDDIQRKVYDMMLRDERYYPSFRQS
PLYVRMLAELDMLKEPSYRGSDDGDGESFNGSPTGSINLSLDDLSNSCHDDNIQLHAFIS
DTGVCNDHGKTYALYAITVLRRNHDGSEDSWKTYRRYSDFHDFHMRITEQFENLTSILKL
PGKKTFNNMDRDFLERRKKDLNSYLQLLLNPEMVKACPTLVHYVYDFLENKQYSKGKGDF
ARKMDTFVNPLRSSMRNVSNAVKGLPDSLAGGMNKAADNMGRMSEKLGQDIKQSVFKVPP
LLPKSDFDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLI
RATYGDTINRYHTHTHTHTHSFIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFRDSYW
PNGILAESPPRRDKNIRMRTRVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQHGP
MNRRLVYVLLEGFLETMFPQYKFPELFVKLHSRSPRTARYTQKVKSTFLKR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacctggtgagtgtggccttcctccctggagctggcagcagagcctgggactat
attaatctctacccctgtctgctgtgtgaccctgctggggcactgcccatctggagagag
gccagtctgtctgtgtggggatgggggggtctaggagtggtgctgttcctcatcacgttt
ggacccttcgctgtcttctacctggccttctatatcttctgcttcgtaggaggtggtttt
gcggtcactctgttgtttggtaaaaccaactcagagagacatctagagaggtgtgaacac
tcctatcttccggccacgcaaacgggtatactgaagacattggatgagatgaggctggag
ccaaagcctatacagatagacaggagactgactggctccaactacatagacgagcctctt
caacaggtcatccagtttgctttgagagattatatccagtactggtattacactctgagt
gaggatgattcgtttctgctggaaatcagacagacggtccagaatgctctggtacagttc
tctacacggtctaaagaagtggactggcagccttatttgaccaccagactggtggatgac
tttgctactcaccttcgagtcttcagaaaggcccaagacagactggaggacagtaaacag
agggacttgtcggaggagatggtggagtcattctttgaggcggaggtggagatggagagg
aacatctgtagagacgtggtctgcacctccctgaaggatgaagaagggttcctgagggat
ctgtgtgaggtactgctctacctgttactacctcctggagacttccacaacaagaacatg
cgatacttcctcagggagattctggcgcgaggcgttctccttcccctggtcaaccagctg
agtgatcctgattacatcaaccagtttgttatctggatgatccgggactcgagctgtaac
tacgaggcttttatgaacatcttgaagctgacagacagagtgtctgaactggaggctgtt
aaagacaaggccctggaggaactacagtacctacgatcactggacaccgcaggagacgat
atcaatgtaataaagaaccagatcaacagtctgatgtttgtgaagaaggtctgtgagacc
aggatacagaggctacagtctgggaaggaggtggatgctctgaaactagcgacaaacttg
ggcaagctgtgtattataccactggaacatattctggtacacaacatcgccctgcagttc
ttcatggactacatgctgggggctggggcccaggcagagctgtttttctggctgacagtg
gagggctacagagtaacagcccagcaacaactcgaggtgatggagggatggcagaaggat
ggaaagaagggaggagacactacaggactgctgaaggctgcagcactaggggtgtatgaa
cagtacttatctgataaggcgtcccccagggtgcaggtagatgaggcgtctgttctcaaa
ctgggagagaagctacagaaggacagtgaccccacgccagagatattcgacgacatccag
agaaaggtgtatgacatgatgctccgtgatgagaggtactacccgtcgttcagacagagt
cctctctacgtcaggatgttagctgaactggacatgctcaaagaaccctcttatagagga
tcagatgacggagacggagaatcgttcaacggttctccgacaggaagcattaatctgtct
ctggatgacctgtcgaactcctgccatgatgacaatatacagctacacgccttcatctct
gatacaggggtgtgtaacgaccacggcaagacctacgccctctacgccatcactgtgttg
cgccgtaaccacgacggcagcgaagactcctggaagacctaccgacgctactctgacttc
cacgacttccacatgaggatcacggagcagtttgagaatttgacgtcgatcctgaagcta
ccggggaagaagacatttaacaacatggacagagacttcctggagaggaggaaaaaagac
ctgaactcgtacctacagctgctgctgaatccagagatggtgaaggcctgtcctactctg
gttcactacgtctacgacttcctggagaataaacagtacagcaaggggaagggagatttc
gcacgcaagatggatacgtttgtgaacccactgcgtagctcgatgcgtaacgtgtccaac
gctgtgaagggcctgccagacagcctggctggagggatgaacaaggctgctgacaacatg
ggacgcatgtctgagaaactgggacaggacatcaaacagtccgtgttcaaggtgcctcca
ctgctccccaagtctgactttgacccagagcactgccgagtctcggcccagctggacgac
aacgtggatgataacatccctctgcgtgtgatgctgctgctgatggatgaggtgtttgac
ctgaaggagaggaaccagtggctccgcaggaacatcaagaaccttctgcagcaactcatc
agagccacatacggagacactatcaacaggtaccacacacacacacacacacacacacac
tcattcatcagagccacatacggagacactatcaacaggaagatcgtggatcatgtggac
ttcatgacagctccagaacaggtggctgactacgtcaagaagttccgggattcgtactgg
cccaacggaatcctggccgagtctccaccacgcagggacaagaacatccgcatgaggacg
agggtcgcagccaagaccaacctattgggaatcatgccagatgagttgaagcacatcatc
ggggcggatacgactcgtaagggaatcctgcgtgtgtttgacatgttccaacacggacca
atgaatcgtcggctggtctacgtgcttctagaaggattcctggagaccatgttccctcag
tacaagttccctgagctgtttgttaaactgcactcccgctcaccacgcacagccagatac
acacagaaagtcaagagcaccttcctgaagaggtga
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