Salmo trutta (river trout): 115175377
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Entry
115175377 CDS
T08542
Name
(RefSeq) rho family-interacting cell polarization regulator 2-like isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
stru03037
]
115175377
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115175377
Cilium and associated proteins [BR:
stru03037
]
Other cilia and associated proteins
Stereociliary proteins
115175377
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
115175377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HR1
HR1_TOCA
Motif
Other DBs
NCBI-GeneID:
115175377
NCBI-ProteinID:
XP_029590466
Ensembl:
ENSSTUG00000046125
LinkDB
All DBs
Position
36:10686648..10787059
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AA seq
1142 aa
AA seq
DB search
MAMADIGEDQDYLNEVMREEMEDVIIYDGVSSRVPEIMAAGTHSPGGPNGIIRSQSFAGF
STLQERRSRCNSFMGNSAVQKKPTSKPKKPHLSGHKASSGSREPKPERVEEVYGALKQGL
DEYLEVHQTGLDKLTSLMKDMKRNSRLVRQDGVLYDLDKQIKTIERYMRRLEFHMSKVDE
LYEAFCIQRRLREGASKMKQAFSASPSTKATRESMSEVNRRYKEYTENMSTLEGELENML
GEFHIKMKGLAGFARLCPGDQYEIFMRYGRQRWKLKGKIEVNSRQSWDGEEMVFMPLITD
LINIKVTELKGLATHILVGSVICETKDLFTAMPQVVAVDVNDLGTIKLNLEVTWFPFDVE
DLTLSSGNVSKATALQRRVSVYSQGTPETPTFQDQSFFKWQPSPTQHRPCLTQHRLSPTQ
HRLSPTQHRLSPTQHRLSFLHGLRNSLLEKLRRSRSFGDLVSLRPRPKSSLEGYVTESTL
PDDVFESGGCGNAECKRLSFTFSDTSVSSPSLAPGQSNPEITVTPPETCPQPQIPNVEVT
VRIHADVVEEAEEGEEEEESRGSSGSVSTSLVSEEAESEWERAESQCNGGPVSLCSERQL
SAVAPGGVFPDHAGPDRDGDEDDSSELLKPVELDTEEPGSLTRQLVRRLTSSDILPEAGV
LSWAGEGSRAFLESSLEETLQSLLLRLESLGQRCRELQDLEQEVMRLEDLLKCRLPGHRS
RSSSLSLMVESALESFDFLNTSDFDDDDTGDDHALQHSVFFDMEAESIGPGGQHPEARGH
LSEALMEDTGVGNSVPGSPLPLTTGNENLDVAIVIHLQYCDHLIQLLSSGGSPWQRRAQL
QKLSAQTQLLEELGEISTERLGSITSAADVLPGLAERPARVALWSECSGSGALFHATLDR
VLKHMHHSYTGPLQQRHPHTAADTVIRLVVSEMVDRSDLASSPTCHPPSALSQDVVTVFQ
FQSYVSEHSVEDMEEHLLQVAREAVFAEGLSGGDSERCLKELEEVSHTVLCPRQQTLRAL
ASLLSHQDPQLSEAAAAYITSASSHTPFRSKAVDCYTQALWEAGVQTQRSACAALSCLQA
VESLWAVVSMCDSADEELRHVAMETLLTFGEEGRLAYEQLDTMPREMVRLGTRRGNAVTT
AF
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggctatggccgacatcggcgaggatcaagattacctaaatgaagtgatgcgtgaggaa
atggaggatgtcatcatctatgatggagtgtcatcccgcgtcccagagatcatggcggcc
ggaacgcactcccctgggggacccaatgggatcatccggagccaatccttcgctggcttc
agcacgctacaggagagacgctcaaggtgtaactcgttcatggggaactctgcagtgcag
aagaagcccacatccaaaccaaagaagccccatctgtcagggcacaaggccagcagtggc
tccagagagcccaaacccgagagggtggaggaggtgtatggagccctaaaacaaggcttg
gatgagtatctggaggtgcaccagacagggctggacaaactcacctctctgatgaaggac
atgaagaggaactccagactggtgagacaggatggagtcctgtatgaccttgacaagcaa
atcaaaaccatcgagaggtacatgagacggttggagtttcatatgagcaaggtggatgag
ctgtatgaggcgttctgtatccagcgcaggctgagggagggagccagtaagatgaagcag
gccttctctgcatctccctccaccaaggccaccagagagagcatgtcagaggtcaaccgc
agatacaaggagtacacagagaatatgagcacgttagagggggagctagagaacatgctg
ggggagttccatatcaaaatgaaaggtcttgctggctttgctcgtctctgtccaggagac
cagtatgagatctttatgcggtatgggcgtcagcgctggaagctgaaggggaagatagag
gtgaactccagacagagttgggacggagaggagatggtcttcatgcccctcatcacagac
ctcatcaacatcaaggtgacggagctgaagggcctggccactcacatcctggtgggcagt
gtgatctgtgagaccaaggatctgttcacggccatgcctcaggtggtggctgtagacgtt
aatgacctgggaaccatcaaactcaacctggaggtcacatggtttccatttgatgtggaa
gacctgaccctgtcttcagggaacgtgagcaaggccaccgccctacagagacgggtgtct
gtctacagtcagggcacgccagagacacccaccttccaggaccagtccttctttaagtgg
caaccctccccgacccagcatcgtccctgcctgacccagcatcgcctgtccccgacccag
catcgcctgtccccaacccagcatcgcctgtccccgacccagcatcgcctgtccttcctc
cacggtctgaggaactccctgttagagaagctgagacgcagtcgctcctttggcgacctg
gtctccctccgccccaggcccaagtccagcctggagggttatgtgactgagtccaccctc
cctgatgacgtctttgagagcggtgggtgtggtaacgccgagtgcaagcgcctctccttc
accttctccgatacttcagtctcctcccccagcctcgcccccggccagtccaaccccgaa
atcaccgtcacgccccctgagacctgcccccagccccaaatccccaacgttgaagtcacc
gttcgaatacatgcagacgtagtggaagaggcagaggaaggtgaggaggaagaggagagt
cgcggtagcagcggtagcgtgagtaccagcctggtcagcgaggaggcggagtcagagtgg
gagagggcggagtcccagtgtaacggaggacccgtctctctctgctcggagaggcagttg
tctgcggtcgctcccgggggtgtgtttccggatcacgctgggccggacagggatggagat
gaagatgacagctcggagttactgaagcccgttgaacttgacactgaagaaccaggcagc
ttgaccaggcaactggtgaggaggctgacatcgtctgacattctgcccgaggcgggggtt
ctgagctgggctggggaggggagcagggccttcctggagagcagcctggaagaaaccctg
cagagtctgctactgaggctagagtcactgggacaacgctgtagagaactacaggaccta
gaacaggaagtgatgcgcctggaggacctactcaagtgccgtctcccgggccacaggagc
aggtcgtccagcctcagcctgatggttgagagcgccctggagagcttcgacttccttaac
acctccgactttgacgacgatgacacgggtgatgaccacgccctccaacactccgtgttc
tttgacatggaggcggagagcatcggacctgggggccagcacccagaggccaggggtcac
ctgagtgaagccctgatggaggacaccggggtgggcaacagtgtacccggcagccccctg
cctctcaccaccggcaacgagaacctggacgtggccatcgtcattcacctgcagtactgc
gaccatctcatccagctcctgtccagtggggggagcccttggcagcgtcgagcccagctc
cagaagctctcagctcagactcagctgttagaggaactgggagagatcagcacagaacgc
ctggggagcatcacctctgctgctgatgtgctcccagggctggcggagcggcctgctcgg
gtggctctgtggtcggagtgtagtggttctggtgcactgttccacgctacgctggaccgg
gtgctcaaacacatgcaccacagctacaccggcccactgcagcagagacacccacacacc
gcagctgacacggtgatccggctggtggtgagtgagatggtggacaggagtgatctggcc
tcctcccctacctgccaccccccttcggccctgtcccaggacgtggtcacagtgttccag
ttccaaagctacgtctcagagcacagcgtggaggacatggaggaacacctattgcaggtg
gccagagaagctgtgtttgcggagggcctgagtggtggcgactcggagcggtgtctaaag
gaactagaagaggtctcacacaccgtcctgtgtccccggcagcagaccctcagggccctg
gcctccctcctctcccaccaagacccccagctcagcgaggctgcagctgcctacatcacc
tctgcttcctcacatacacccttcaggtcaaaggcggtggattgctacacacaggccttg
tgggaggctggagttcaaacccaaaggtctgcctgtgctgctcttagctgtctacaggca
gtagagagcctctgggcggtggtatcaatgtgtgactcggcagacgaggagcttcgccac
gttgccatggaaaccctgctcactttcggtgaggagggtcgtctggcgtatgagcagctg
gacacgatgcccagagagatggtacgactggggacgcggcgagggaacgccgtcaccacc
gccttctga
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