Salmo trutta (river trout): 115175477
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Entry
115175477 CDS
T08542
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X1
KO
K12897
transformer-2 protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115175477
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115175477
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115175477
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115175477
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115175477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
GRP
Motif
Other DBs
NCBI-GeneID:
115175477
NCBI-ProteinID:
XP_029590583
Ensembl:
ENSSTUG00000046838
LinkDB
All DBs
Position
36:13631787..13638589
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AA seq
339 aa
AA seq
DB search
MSDLEDGHFDGRDSRSPSKSDRGSPVRVKSESRSGSPSPSRVAKHSESRSRSKSRSHSRR
HSNRRYSRSRSPSNRKKSRSYSPEYRKKKSQSASPNRRRPSSRSHDFRKETFSQGAGGGE
DARANPDPNQCLGVFGLSLYTTEKDLREVFGRYGPLAGVNVVYDQRTGRSRGFAFVYFER
IADSKEAMERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTHNGGGGERNNGGSSGG
GGRRGRDSYDRYDDRRGGGYDRGYDRGYDRGDRGYDRYDEYDKYSRRRSPSPYYSRYRSR
SRSRSYSPRKYTHVSTHTRAHVHTHLKSHCSTLNYTLFV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacctagaggatggacactttgatgggcgagactctcgctccccatccaaatcg
gaccgtggcagtcctgttcgggtcaagtcggagagcagatctggctccccgagcccatcc
cgcgttgccaaacactcagagtctcggtcccgctctaagtccaggtctcactctcgtagg
cactctaaccgccggtacagccgctctcgctccccctccaaccggaagaagtcccgctcc
tacagcccggaataccggaagaagaagagccagagtgcatcgcctaaccgccgccgcccc
agcagcaggagccatgacttcagaaaagagacattcagtcagggagcaggaggtggtgag
gatgccagggcgaaccctgaccccaaccagtgtctgggggtgtttggactgagcttgtac
accacggagaaggacctgagggaggtatttggccggtacggccctttggctggggttaat
gtggtctatgaccagcgcaccgggcgctcccgtggcttcgccttcgtctacttcgagagg
atcgccgattcaaaggaggcaatggagcgggccaacggtatggagctggatgggagacgt
attagagtggacttctctatcaccaagagggcccacacccctacgcctggcatctacatg
ggccgacccacacataatggtggtgggggggaacgaaacaatggcggcagcagcggtggt
ggagggaggaggggacgggactcgtacgaccgatacgatgatcgacgcggtggtggctac
gaccgtggatatgaccggggatacgatcgtggagaccggggatacgacagatatgacgag
tacgacaagtacagtcgcagacgctctccctcaccctactacagtagatacaggtcgcgc
tccaggtctcgctcatacagcccacgtaagtacacacacgtaagcacacacacacgcgcg
catgtccacacacacctcaaaagccattgttcaactctaaactatactttgtttgtctga
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