Salmo trutta (river trout): 115175503
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Entry
115175503 CDS
T08542
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115175503 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115175503 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115175503 (nup153)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115175503 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
115175503
NCBI-ProteinID:
XP_029590633
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All DBs
Position
36:complement(14743474..14763331)
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AA seq
1443 aa
AA seq
DB search
MAATGGGKIRSRRCHSASKPYAKSKQQQPGLISRVTDTVKSIVPSWLQKYFRNGEAAEGG
GAVVGAEQNSQAPPPNGSEEVAPLPDGRDSPEPGTSNTEPSTSRASLNFQDVLSRPPLNR
SHLHFPSLDTSPVRRGPSSLFSQPSTSSAPFSGGPFAGASPSFSLVKEIKDNSSQHEDDN
ISTTSGFSSRASDKDVPNSKTASLPQLWSPEMDRTHSGPQQSQSSLKKPAFNLSVFGTSS
TVSVSQSSQSSTSTMNSSVLNSSQLGDSPFYPGKTTYGGAAAVRTARSRTAIPYQAPLRR
QIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPSTVSSPLSTSLDGSTLHLSH
FQAKKKQLDSPLPPVQKLVIPAAASVSGNRSMSFRPSLTPGGLARTPRDTPTRQSPLIPE
AVAGPSQSTSNILPTYPLSSTPASSSTGSGGGKMKRERTSTRPSSKRPEDQVAELSDLPA
ISLPHSPSFSLPSFNFFPLPTAILTTSPVLEEPVPNKVPPTTAPSTPPSTPFTFSSPIVM
ATAASPPSFSPSSGFTFSAPVVKTGLSLSNGKMATPVLAAVKHAASESMDEFEGPCKPAK
VLKQGSVLDLLNGPGFAVPVTQTPPVPKAHQETPALSTTTPSVGDLFKAPAGSWDCDTCV
VQNKPTDTKCVTSVTPRLNSGSSLAKTDSIPLLSGLEGSTTTPAATFGALFTKPAGSWDC
DICLVQNKPDAVKCVACETAKPGTGVKATLTMPAFSEAKTLPAAAPLLGFGDKFKKPEGA
WECGVCMVQNKAQDTKCVSCGFAKPGATAAPPSLTPAPVSATPLLGFGAQFKKPEGAWEC
DVCCVENKGADKECVACQTPKPGAKVEPKAFGSSSFGIQSSSDSGGFKFGMGASSDSGSG
GFKFGGTLLDSSSSGGFKFGASVSSDSTSTDTSSSAGFKFGGSSEGCKFAASAASTPAVD
EGKKAEAPSMGAGFKFGVGGGLSFGTAAAASTDSEPPYGGFSFHLVATSDSSSSTFSLPV
STENDSGASTETTTTTTTAAAPMFGKLAEAKATVLTTPLGGSIFRESLEKDKAPSFTFGK
HEKEVASMGSGFLFSVPSKEGGPSASSTGFSFSKPDPPKDQPNAPALAFGKQEDRSETPA
AEAPKPSFSFGQSTTDAAAPKPAFGFMASTTSSSTTPAPSLFGTLSSSTPAPAPIPAPST
FLFGQSASTEATPAKSFLFGQSQDSLPAPALSLNPGPAQPFLFGSGPNAAAPSFTFGAAA
PSTASSAAPSAAPAPFVFSPASSTGFGSGQAPTFGQGSSQPSAPAFGSPAPSPFSATASQ
PPAFGAKPNSVPVFGHQANSTPAFGSSAPTTSGGCFQFGGASVFGTSSNSTGVFAFGGAP
GGSPAPSATPSIAPQPSAPGSGFNFAAPPTFNIGSKSTTFTAAAAGQHSIPGRKIKTAVR
RKK
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgggtggagggaaaattagaagcagaagatgtcatagcgcttcgaaacct
tacgccaaaagcaaacagcagcagcctggcctgattagtcgagtgacggacacagtcaag
agcatcgttccttcttggctgcagaaatacttcaggaatggggaggctgcagagggggga
ggggccgtagtgggggcggagcagaacagccaggcccctcccccaaatggcagcgaggag
gtagcaccccttcctgatggacgggactctccggagcccggtaccagcaatacagaacct
tcgacaagcagggcatccctgaactttcaggatgttctgtcgaggccccccctcaaccgc
tctcacctccacttcccctccttggacacctccccggtccgcaggggccccagctctctc
ttctcccagccctccacctcctctgcccctttctctgggggccccttcgctggggcctcg
cccagcttctcccttgtcaaagagatcaaggacaacagctcacagcacgaggacgacaac
atctctaccaccagcggcttctcttcacgtgcatcagacaaagatgtgcctaattcaaag
accgcatcgctaccccagctctggtccccggagatggaccggacccactctgggcctcag
cagtcccagtccagtctcaagaagcctgcgttcaacctgtctgtctttgggacgtcctcc
actgtgagtgtcagtcagtcaagtcagtcctccacttctacgatgaacagttcagtgcta
aattccagtcagttgggggattcccccttctacccagggaagactacctacgggggagcg
gctgctgttaggacagcccgttcacgcacagccataccttaccaggctccattgcggaga
cagatcaaggccaagcctgctggggctcagccctgtggggtgaccagcgccaccgcccga
cgcatcctacagtccctggagcgcatgtccagccccctcgctgatgccaagagaatcccc
tctactgtttcctctcccttgtcaacatcactggatggcagcactctacacctttcacat
tttcaggccaaaaagaaacagctggactcgcccctccccccagtccagaagctggtgatc
ccggcggcagcgtcagtgtcggggaaccgttccatgtccttcaggccctctctgaccccc
gggggcctggctcggactcctagagacacgcccacaagacaatcccctctgattcctgaa
gcagtggcaggtccttctcaaagcacaagcaacattctacccacctaccctctgtccagc
actcctgcatccagcagcacagggtcaggaggtgggaagatgaagagggagaggaccagc
acaagaccctcttccaaacgtcctgaagaccaggtcgctgagctatcggacctgccagcc
atctcgctcccccacagcccgtccttcagtctgcccagcttcaacttcttcccgcttccc
actgccattctcactacctcacctgtcctggaggaacccgtccctaacaaggtgccaccg
actacagccccctctacccctccctccacacctttcaccttctcctcccctatcgtcatg
gcaactgctgctagcccaccgtccttctccccgtcttctggatttaccttcagtgcacct
gtagtgaaaacgggtctgtcactatccaacgggaagatggccaccccagtattggcagca
gtgaagcacgctgccagtgagagcatggatgagtttgaagggccgtgtaaaccagccaag
gtgttgaaacagggcagtgttctggacctcctgaatggacctggatttgccgttcctgtt
actcagacgccccctgtccccaaagcccaccaggagaccccagcactgtccaccaccacc
ccctccgttggggacttgttcaaagcaccagcaggctcctgggactgtgacacctgtgtg
gtgcagaacaaacccactgacaccaagtgtgtgacctctgtgaccccacgactaaactct
ggctcctctttagcaaaaaccgacagtatacccttgttgtccgggctggagggttccacc
actactcccgctgcaacttttggggccctgttcacaaagcctgcaggaagctgggactgt
gacatttgtctggttcagaacaagcctgatgctgtcaaatgtgtggcctgcgagacagcc
aagcctgggactggagttaaagccacactgactatgcctgctttctcggaggctaagact
ctgcccgctgctgccccactcctgggcttcggagacaagtttaagaagccagagggagca
tgggagtgtggcgtgtgcatggtgcagaacaaggcgcaggacaccaagtgtgtttcctgt
gggttcgctaagccaggagcaacggcagcgcctccatctctaactcccgcccctgtcagc
gccactcctctactaggctttggggcccagttcaagaagccagagggagcgtgggagtgt
gacgtgtgctgtgttgagaacaagggagcagacaaggagtgtgtggcctgccagacaccc
aagcctggagctaaagtagagcccaaagcatttggttcctcatcgtttggtatccagtcc
tcgtctgactcggggggattcaagtttggcatgggggcgtcatcggactctggttctggg
ggcttcaaattcggcggcaccctcttggactcctcctcttcagggggcttcaaatttggt
gcatctgtctcatcagactctacctcgacagacaccagcagctctgcaggcttcaaattt
ggcggctcctctgagggatgcaaatttgcagcttcggctgcttccacccctgcagtggac
gaggggaagaaggctgaagcccccagtatgggtgccgggttcaaatttggcgtcggcggt
gggctctcgttcggcactgcagcagctgctagcacggacagcgaacccccttacggtggg
ttctcctttcatctggtggcaacctctgattcatcctcctctactttcagcctccctgtt
tctacagagaatgacagtggagcttctacagaaaccacgactaccaccaccacagcagca
gctcctatgtttgggaagctggctgaagccaaggctactgtgctgaccacaccactaggg
ggcagcatattcagggaatcactagagaaagacaaggccccttctttcacctttgggaag
catgagaaggaggttgcctctatgggttctgggttcctgttcagtgttcctagtaaagag
ggggggccatcagcctcatctacgggcttttccttcagtaagccagacccacctaaagac
cagcccaatgcacctgccttggcctttgggaagcaggaagaccggagtgagaccccagca
gcagaagcccctaagccctcattcagctttgggcaaagcacaacagatgctgcagcccca
aagccagcatttgggttcatggcaagcaccacctcttcttccaccacccctgcccccagt
ctgtttgggaccctcagcagctctacccctgccccagcccctatcccggcccccagtacc
ttcctgttcgggcagagtgcctccactgaggccaccccagccaagtccttcttgtttggg
cagagccaggacagcctgcctgcccctgcactctctctgaaccctggcccggctcagccc
ttcctgtttgggtctggacctaatgctgctgctccctccttcacttttggtgcagcggcg
ccctccactgcctcatctgcagctccatcagcagcccctgctccgtttgtattcagccct
gcgtcctccactgggtttgggtcaggacaagctcctacctttggtcagggctcctcccag
cccagtgccccagcgtttggttcccccgccccgtcacccttctctgccacggcctcccag
ccccctgccttcggagccaagcccaactctgtccccgtgtttggccaccaagccaactcc
actcctgcttttggctcatccgcccccaccacatcaggtggatgtttccagttcggcgga
gccagcgtgttcggcacctccagtaacagcacgggggtgtttgctttcggaggggcacca
ggagggtcccccgccccttctgccacgccctccatcgcaccccaacccagtgcacctgga
agtggtttcaactttgcagcgccccctacctttaatattggatcaaaaagcaccaccttc
actgcagctgccgccggacagcactcaatccccggtcgcaagatcaaaacagccgtccga
cgtaagaagtaa
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