KEGG   Salmo trutta (river trout): 115175516
Entry
115175516         CDS       T08542                                 
Name
(RefSeq) 26S proteasome complex subunit SEM1-like
  KO
K10881  26 proteasome complex subunit DSS1
Organism
stru  Salmo trutta (river trout)
Pathway
stru03050  Proteasome
stru03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    115175516
  09124 Replication and repair
   03440 Homologous recombination
    115175516
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115175516
   04131 Membrane trafficking [BR:stru04131]
    115175516
   03051 Proteasome [BR:stru03051]
    115175516
   03400 DNA repair and recombination proteins [BR:stru03400]
    115175516
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     115175516
Membrane trafficking [BR:stru04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    115175516
Proteasome [BR:stru03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     115175516
DNA repair and recombination proteins [BR:stru03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     115175516
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 115175516
NCBI-ProteinID: XP_029590660
Ensembl: ENSSTUG00000041359
UniProt: A0A674DBQ0
LinkDB
Position
36:14916384..14930474
AA seq 70 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGSKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagacaagaaacagactgtggatttgggattattagaggaggacgatgagtttgaa
gaattcccagccgaggattggacgggtctggatgaggatgaagatgcccacgtgtgggaa
gacaactgggatgatgacaacgtagaggacgacttctctaatcaactccgagcggaactg
gagaaacatggttccaagatggagacgtcgtag

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