Salmo trutta (river trout): 115175529
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Entry
115175529 CDS
T08542
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115175529 (vps50)
Membrane trafficking [BR:
stru04131
]
Protein recycling
Others
EARP complex
115175529 (vps50)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
115175529
NCBI-ProteinID:
XP_029590679
Ensembl:
ENSSTUG00000044307
LinkDB
All DBs
Position
36:complement(15690833..15930563)
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AA seq
975 aa
AA seq
DB search
MQKIKSLMARQGLKSPQESIADLSPVEDIRIPSKEEMREMREQPIDPQAEQEIINSIQEV
YYSNDSFDMVQHELEKLPPELNLQELEEYRDKLKRQQAAVSKKVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLSISKEDFTEASLGLLANQRRRHLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTRVQLAYTLLEKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITQDSYVPCLSDLCKALWEVMLSYHRTMQWHEEQDKEEAPPTTDE
AGAADTEEAAVDHSYVKKKLEHGLTRIWQEVQLKVKAYLLGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSELLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQSRSPSVSPSRQVLSSQDQVLSSQDQEVLSLFQHFSQEGNPFERHIDNKD
EETEDVLASNGYESDELEKCVYQDYDSDSDVPDELKQDYVDEQTGDVPLKSASRETLRSR
KKSDYSLNKGSNAPILTNTTLNVIRLVGKYIQMMNILKPIAFDVIHCVSQLFDYYLYAVY
TFFGRNDMYESSGPGLISSRLRTTLNRIQESLIQMESLGEGSASVHGGPGEDRKEKVPSP
HLSQLVVLTASETLYGLAQRVVATESLVFLAEQFEFLQSHLDTMMPAAKKPFLQQFYSQT
VSTASELRKPIYWVVAAKALDYEQMLLLMAGVKWDIREIMSQHNVYVDVLLKEFEEFNKR
LGDVSRHVRVPLPVSNVLWEHCIRLANRTLVEGYGNVKKCSNEGRALMQLDFQQFLMKLE
KLTDMRPIPDKDFVETYIKAYYLTENDMEQFIKNHREYSMKQLANLVNVCLGSHINKKAR
QKLLAAIDDIDRPKR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagataaagtcacttatggcccggcagggcctgaaaagcccacaggagagcatt
gcagacctcagcccagtggaggacatcaggatcccaagcaaggaggagatgagggagatg
agggagcagcccattgacccccaagcggagcaggagatcattaacagcatccaggaggtc
tactactccaacgactcctttgacatggtgcagcacgagctggagaaactcccacctgag
ctgaacttgcaggagctggaggagtacagagacaagctgaagagacaacaagcagcggtt
tccaaaaaagttgccgatcttatcctggaaaaacagccgtcctacgtcaaggagttggag
agggtgacgtcattacaaaccaatctacagctggctgcagtgatctgcaccaatgctagg
aggcagctgagtatttcaaaggaggacttcaccgaggccagcctggggctcctagccaat
cagaggaggagacacctgctcacagggctgctgaagtcactgaggaccatcaagaccctg
caaaggactgatgttcgcctcagtgagatgctggaggaggaggactatcctggtgctatc
cagttgtgtctggaatgtcagaaggctgccagcacattcaaacactacagctgcataagt
gagttgaattccaagctacaagacactctggagcaaatagaggagcagctggatgtggcc
ttgtctaaaacctgcaagcactttgacgtctcccactacaccagagttcagctggcgtac
accctcctggaaaagacccagacggccatggaccagctccacatgcacttcacccaggcc
atccacaacactgtgttccaggtggttctgggatacgtggagctctgcgcaggcaacgcc
gacaccaagtttcagaagatgcagtacaaggacctctgcacgcacatcactcaagacagc
tacgtcccctgcctgagcgacctgtgcaaggcattgtgggaggtgatgctcagctaccac
cggaccatgcagtggcatgaggagcaagacaaggaggaggccccacccaccacagatgaa
gcaggtgctgcagacacagaggaggcggctgtggaccacagctatgtaaagaagaagctg
gagcatggactcactcgaatctggcaggaagttcagctgaaagtgaaagcctatctactt
ggtacagacatgtctaacttcaaatatgatgacttcatcgtggtcttggatgttatcagc
aggctgatgcaagtgggggaggagttctgcggcagtaagtcagagttgctgcaggaatcc
atcaaacgtcagagcgttaactacttcaagaactaccacaggacacgcctggaggagttg
cggatgtttctggagaatgagacatgggaactgtgtcctgtcaagtccaacttcaacatc
gctcagctccatgagtttaagttcatgggtcagagccggtccccctcagtgtctcccagt
agacaggtgttgtccagtcaggaccaggtgttgtccagccaggaccaggaagtcctgtct
ctgtttcagcacttcagtcaggaggggaacccctttgagaggcacatcgacaacaaggat
gaggagactgaggacgtactggcctccaacgggtatgagtccgatgagctggagaagtgt
gtgtaccaggactatgacagcgacagtgatgtccctgatgaactcaagcaggactacgtg
gacgagcagaccggagacgtccctctcaagagtgcgtcaagggagactctgcgcagccgg
aagaagtccgactacagcctaaacaaaggctccaacgctcccatcctgaccaacacaacc
ctcaacgtgatccgactggtcgggaagtacatacagatgatgaacattctgaaaccaata
gcctttgatgtcatccactgtgtttcccagctgtttgattactacctgtatgctgtctac
accttcttcggccgcaatgatatgtatgaatcatcaggtccgggtctgatcagtagccga
ctgagaacaacactgaacagaatccaggagagcctcatccaaatggagtctctgggggaa
ggcagcgccagtgtgcacggtggtccgggggaggacaggaaggagaaggtgcccagcccc
cacctcagccagcttgtggtcctgacagccagcgagaccctctacggcctggcccagagg
gtggtcgccacagagtcactggtgtttctggccgagcagtttgagttcctgcagtctcac
ctagacaccatgatgcctgcagccaagaagccgttcctccagcagttctactcacagact
gtctccacggccagtgagctacgtaaacccatatactgggtggtggcggccaaggcttta
gactacgaacagatgctgctgctgatggctggagttaagtgggacattagggagataatg
tcgcagcacaacgtgtacgtggacgtcctgttaaaggagtttgaagagtttaacaagagg
ctgggtgatgtgtccaggcacgtccgggtccctctgcctgtgtctaatgtcctgtgggaa
cactgcatccgtctggccaacaggactctggtggaaggctatggtaacgtgaagaagtgc
agtaacgaaggacgggccctgatgcagctggacttccagcagttcctgatgaagctggag
aagctgacggacatgaggcccatccctgacaaggactttgtggagacctacatcaaggcc
tactacctgactgagaatgacatggagcagttcatcaagaaccacagggagtactccatg
aagcagctggccaacctggtaaacgtgtgtctgggctctcacatcaacaagaaggcccgg
cagaaactcctggcggctatcgacgacatcgacagaccaaagagatag
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