Salmo trutta (river trout): 115175538
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Entry
115175538 CDS
T08542
Symbol
pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115175538 (pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115175538 (pex1)
Membrane trafficking [BR:
stru04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
115175538 (pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_22
AAA_14
nSTAND3
TIP49
RNA_helicase
NPHP3_N
ATP-synt_ab
AAA_5
AAA_28
AAA_33
AAA_18
ABC_tran
RuvB_N
DUF815
Sigma54_activ_2
Bac_DnaA
NACHT
IstB_IS21
APS_kinase
AAA_29
Motif
Other DBs
NCBI-GeneID:
115175538
NCBI-ProteinID:
XP_029590687
Ensembl:
ENSSTUG00000046463
UniProt:
A0A674E8I8
LinkDB
All DBs
Position
36:16088038..16107831
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AA seq
1273 aa
AA seq
DB search
MLGNHGIQPVTLIFHNTKNCFLHLPSNLLKQLSLHDNQALELSWGHDARVFLSWTRSRSP
ANQEDHKVALSRQLGEKLGLRDGEQGFLRSCQQVLSVQQVFVEPLSSDDWEILELHSAAL
EQQLLDQIRVVFPDAVFPVWVDQRTVIYIRIASLTPTVPYGRLEQFTELHVSPKIRAGSE
DLSCAPFGSSLSNQNQPLHRQPNFDLSPSSRSSQEFSVQETGLPVEQHLNTAALQSPQQW
GGIADVKSLVRYMLTGNYDPVRETPPIPTIPALLSDSVFRVCRAPPVSPGPLSATHGVVH
ILPWGQQMGGNINGGQPAVTYGLLSKVLSPKEVRERAKQAMEKKKSGGAGGAPQPGGAGG
AGDREEKEDATVVKVLCHLTEGLKGKQGSSRERELHSGKVWIPQSLETSLHINPHSSVRI
KPIKSTPKVATSIHLQPLQPLLAAESEVEIQTAFLGWLHTQSHEPLACLTGRCNTILLPA
TEGKVEFALTVLKSEPEPESKAPDQLFLLAPCVIQKSDIQVVREPVTMPIVKSMGETPNQ
DLPSLSSLGGVEELSKTGFDFLSHSLMGRPLSWELVSTGRGLRGGALLITGAKGSGKTAL
SKALCRKTMEDLDAHVEVVDCKKLKGKRAETVRQILEEVFEQAVWRQPSVVLLDDLDHVT
GAPTSPEHEHGPEALLRLHIAQSLRDMVHDVVVRSSLVCLVICSHSEHSLHPSLREVQGS
HFLQGFIHIQPPDQAQRGEILRCLILSKTAVSKETLHTLDLGIVAKETEGYMPRDLALLL
ERAIHANALHRARSTQGVCLSWRDFVQALKGFTPPTLWEAQLQSPSGAGLERVGGLHQVR
QLLMDTILLPAKYPVLFSSLPIRQRSGLLLYGAPGTGKTLLAGAVAKESGMNFISVKGPE
LLSKYIGASEQAIRDIFQRAQAAKPCILFFDEFDSLAPRRGHDNTGVTDRVVNQLLTQLD
GVEGLQGVYVLAATSRPDLIDPALLRPGRLDKSLYCPPPDQEARVEILRALSHSVPLADD
VDLEQMAGATDTFTGADLKALLYNAQLEAIHSSLGPSLLHDLGSGSDSDISLSSMIFLNH
SSGSDDSTGEGERGCGLDHSMVLLDLGDVPPEDPRGNIWRLYFGSSFESELGNPSPSGLN
SQGVSGPNSNDLTGASVRDPGFSHPPAYMSSLQDGYEELSHEQLDRLRLEISNIKSNYRR
ATEDSVPVQGGPIRPGVLLCQAHLTSALDATRASLSKQDWRRYTDLYESFGASGEGKSQS
TVTFKPGQRVTLA
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgttgggcaatcatggcatccaacctgtcactctgattttccacaacacgaagaactgt
tttcttcaccttccttcaaacttgttaaaacagctctctctccatgacaaccaggccctg
gagctgtcctggggtcatgatgcccgtgtgttcctcagctggaccagaagcagaagccct
gccaaccaggaggaccataaagtagcgctgagcaggcaactgggagagaagcttggactc
agagatggagagcagggcttcttgcggtcgtgccagcaggtcctgtctgtacagcaggtg
tttgtggaaccactctcctccgacgactgggaaatcctggagctccacagtgcagcgctg
gagcagcagctcctggatcagattagagtggtgtttcctgatgcagtgtttcctgtgtgg
gtggaccagagaacagtcatctacatcagaatcgcttcactcaccccaactgtaccgtac
ggtcgattagagcagttcacagagctacacgtctctcctaaaatccgtgctggaagtgag
gacctctcctgcgctccttttggatcatccctatccaatcagaaccagcccctccacagg
cagccgaactttgacctctcaccctcctccaggtcctctcaggagttcagcgttcaggag
actggacttcctgtagaacaacatcttaacactgctgccctccagagcccccagcagtgg
ggtgggatagcagacgtaaagagcctggtcaggtacatgctaacagggaactatgaccct
gtgagagagactccccccatccccaccatccctgccctcctcagtgactcagtcttcaga
gtgtgcagagcaccgcctgtgtctcctggccctctgagtgccacccatggggttgtccac
atcctgccctggggccagcagatgggaggtaatatcaatggaggccagccagctgtgacg
tacggcctactgtccaaggtcctctctcccaaggaggtgagagagagggctaagcaggcc
atggaaaagaagaagagtggcggtgctgggggtgctccccagcccggtggtgctggtggg
gcaggagacagggaggaaaaagaggatgccactgtagtcaaggtgttatgtcatcttaca
gaggggctgaaagggaagcaggggtcatctagagagagagagctccacagtggaaaggtc
tggatcccacaatccctggaaactagtcttcatatcaatccacactcgtcagtgagaatc
aagccaatcaagtcaactcctaaagtagccaccagtatccacctgcagcctttacaacca
ctgcttgcagcagagagtgaggtggagattcagactgccttcctgggttggctgcacacc
cagagccacgaaccactagcctgtctgaccggccgctgcaacaccatcctcctacctgcc
actgaaggcaaggtggagtttgctctgactgtgttgaagtcagaacctgagccggagagt
aaagctcctgaccagttgtttctgttggctccatgtgtgatacagaaatcagacatacag
gttgtcagggaacctgtaacgatgcctatagtgaaatccatgggtgagacccctaatcaa
gatctaccctctctcagcagtcttggtggtgtggaggagctgagtaagacggggtttgac
ttcctctcccacagcctgatgggacggcctctctcctgggagctggtgtccaccggtcgg
ggcctccggggcggagccctgctcattacaggggccaagggaagtgggaagacggctctc
tccaaagctctatgtaggaaaactatggaggacctggatgctcatgtggaggtggttgac
tgcaaaaagctgaaagggaagagagcagagaccgtgaggcagatattggaagaggttttt
gaacaggcggtgtggagacagccctcggtggtcctgctggatgacctggatcatgtgacg
ggggctccgacttcaccggaacatgaacacggaccagaggctctcctaaggctgcacatt
gcccagagtctaagagacatggtacatgacgtggtggtgcgctccagcctggtgtgtctg
gtcatctgcagtcacagtgaacattccctccacccatcactcagggaggtgcagggctcc
cacttcctccagggcttcatacacatccagcctcctgatcaggcccagagaggagagatc
ctgcgctgtctgatcctcagtaagactgctgtatccaaggagaccctacacacgctcgac
ctggggattgttgccaaggaaacagagggctacatgccccgtgacctggccctgctgcta
gagagagccatccatgccaacgccctacacagggcacgcagcacccagggggtgtgtctg
tcgtggagggattttgtgcaggctctgaagggcttcacccctcccactctgtgggaggct
cagctgcagagccccagtggtgcaggccttgagagggtaggggggctgcatcaagtacgc
cagttactcatggacaccatcctgctaccggccaagtatccggtgctcttctccagcctt
cccatccggcagcgctcaggacttctgctgtatggcgctccaggcactgggaaaaccctg
ctggctggtgccgtggccaaggagagtgggatgaacttcatcagtgtcaagggtcccgaa
ctcctcagcaagtacattggagccagtgagcaggctatcagagacatcttccagagagcc
caggctgctaagccctgcatcctgttctttgatgagtttgactccttggcacccaggagg
ggtcacgacaacacaggggtcactgaccgggtggtcaaccagctactgacccagctggat
ggggtggagggactacagggtgtgtatgtcctggctgccactagtcgtccagaccttata
gaccctgccctgctgaggcctggccgcctggacaagtccctctactgcccccctcctgac
caggaggcgcgtgtagagatcctgagggctctgagccactcggttcccctggctgacgat
gtggacctggagcagatggccggggccacagacacgttcactggcgccgacctgaaggcc
ctgctgtacaacgcccagctagaggccatccacagcagcctggggcccagcctgctgcac
gacctgggctcgggttcggacagcgacataagcctgtcctccatgatctttctgaaccac
agcagtgggtctgatgactcgacaggggaaggggagagagggtgcgggctggaccactcc
atggttctgctggacctcggtgacgtcccccctgaggacccccgtggtaacatctggagg
ctgtacttcggcagctcctttgagtctgagctgggcaacccttccccctcaggactgaac
tcccaaggtgtctcggggcccaactctaatgacctgaccggtgcgtcggtcagagaccct
ggcttctcccaccccccggcctatatgtcctctctacaggatggctacgaggagctcagc
catgagcagctagaccgcctccgtctggaaatcagcaacatcaagagcaactacagacga
gctactgaggacagtgtcccagtccagggtggccccatcaggccaggtgtgctcctgtgt
caggcccacctcacctcagccctggatgccaccagagcctccctcagcaagcaggactgg
aggaggtacacagacctgtatgagtccttcggagcttcgggagaaggaaagtctcagagc
acagtgacattcaaacccggccaaagagtaacgctcgcttaa
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