Salmo trutta (river trout): 115175611
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Entry
115175611 CDS
T08542
Symbol
zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115175611 (zc3h12a)
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
115175611 (zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
115175611
NCBI-ProteinID:
XP_029590845
Ensembl:
ENSSTUG00000040008
UniProt:
A0A674D6A4
LinkDB
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Position
36:20329110..20343039
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AA seq
622 aa
AA seq
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MHPSGTQCSAPEESGKTATDPGEAQLDFYRKLGYSPAQVQTVLQKFGLNTDTNRILGELV
QTGASPEGMEKEGAPTTMSVLIASGETLSSLPLTPPSIWEEAASEEGDDLKPIVIDGSNM
AMSHGNKEVFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVPITDQHILRELERK
KIMVFTPSRRVAGKRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERQEWKRFIEERLL
MYSFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQPCPYGRKCTYGIKCKFYHPERVN
QSNRSLADELRENAKLPLSPQKHPTTGPGLAYGLSLEEEMAQKLTLEQWKGSLKKGLTTE
NVLLLKGGHRASWRSPAKASTNRHSPTDLDSALASGSQERLDSGLGSFESQASDPSRNHF
DHYGNAGYRKCQSQSAPSMKQQRCSLPSNLPCSCCSHAPQPSLGPSAGYQQHHSPHHSMG
PASTHNPDMMTYYPPCYPNYGTPMYPVSMHQYSHPSDFQQQGRVHRSQQTFWSDPFGTYP
QTLHSIAQVEQQRHWPPARTQPSPHGEGREREDGREREDVRKKLLAIFNGRLVDRAMNMF
PHLMDPQRLVAEILTLRSSQGL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgagtggcacccaatgctctgccccagaggagagcggcaagaccgccacagac
cctggagaggctcaactggacttctaccgtaaactgggctactccccagcgcaggtccag
accgtgctgcagaagtttggcctgaacacagacactaacaggattctgggggagctggtg
cagactggagccagcccagaaggaatggagaaggagggagccccaactaccatgtctgtc
ctgattgccagtggggagacccttagtagcctgcccctcacccctccatcaatttgggag
gaggcagccagtgaggagggagatgacctgaaacccatagtgatcgatgggagtaatatg
gctatgagccacgggaacaaggaagtgttttcctgcctgggaatccagctggctgtgaac
ttcttcctggacaggggtcatactgatatcactgtgtttgttccctcatggaggaaggag
cagcccagaccagatgtccccatcacagatcaacacattttgcgtgagctggagagaaag
aaaatcatggtgttcaccccttcacggcgtgtagcgggcaaacgtgtggtctgctacgac
gatcgcttcatcgtcaagctggcgtacgagtcagatggtgtcatcgtgtccaacgacaca
taccgtgaccttcagggcgagagacaggagtggaagcgcttcatcgaggagaggctgctc
atgtactcgtttgtcaatgacaagttcatgccccctgatgaccccctgggtcgccatggt
cccacactggagaactttctacggaaggttcctcggttaccacgcaaacagccatgtcct
tacggaaggaaatgcacttacggaataaagtgtaaattctaccacccggagcgagtcaac
caatccaatcgctctttggctgatgagctgcgggagaatgccaagctgcccttgtcacca
cagaaacaccccaccacaggtcctggacttgcctatggcctttccctggaggaggagatg
gctcagaaactgaccctagaacagtggaagggctccttgaagaaaggcctcaccactgag
aatgttcttcttctcaagggaggccatcgcgccagctggaggtccccagctaaggccagc
accaaccgacattccccaaccgacctggactcagccctggccagtggctctcaagagagg
ctagattctgggctgggctccttcgagagccaggcatctgacccctctagaaaccacttt
gatcactatggcaacgctgggtacaggaaatgccagtcacagtccgcccccagtatgaaa
caacaacgctgttctctccctagcaacctgccttgtagctgctgctcccatgctcctcag
ccttcactgggccccagtgcaggataccaacaacaccacagcccacaccatagcatgggc
ccagccagcacccacaacccagacatgatgacctactaccccccttgttaccccaactat
ggaacaccaatgtatccagttagtatgcatcagtacagccaccccagtgacttccaacag
cagggcagggtccaccgttcacagcagaccttctggtcggacccgttcgggacttatcct
cagactctccatagcattgctcaggtagagcagcagagacactggccccctgcccggaca
cagccgagcccccatggggagggcagggagagggaggacggcagggagagggaggatgtc
aggaagaagctgctggccatctttaacggccgtctggtggacagggccatgaacatgttc
ccccatctcatggacccacagagactggttgctgagatcctcaccctgagatcctctcag
ggcctgtga
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