KEGG   Salmo trutta (river trout): 115175611
Entry
115175611         CDS       T08542                                 
Symbol
zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115175611 (zc3h12a)
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     115175611 (zc3h12a)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 115175611
NCBI-ProteinID: XP_029590845
Ensembl: ENSSTUG00000040008
UniProt: A0A674D6A4
LinkDB
Position
36:20329110..20343039
AA seq 622 aa
MHPSGTQCSAPEESGKTATDPGEAQLDFYRKLGYSPAQVQTVLQKFGLNTDTNRILGELV
QTGASPEGMEKEGAPTTMSVLIASGETLSSLPLTPPSIWEEAASEEGDDLKPIVIDGSNM
AMSHGNKEVFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVPITDQHILRELERK
KIMVFTPSRRVAGKRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERQEWKRFIEERLL
MYSFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQPCPYGRKCTYGIKCKFYHPERVN
QSNRSLADELRENAKLPLSPQKHPTTGPGLAYGLSLEEEMAQKLTLEQWKGSLKKGLTTE
NVLLLKGGHRASWRSPAKASTNRHSPTDLDSALASGSQERLDSGLGSFESQASDPSRNHF
DHYGNAGYRKCQSQSAPSMKQQRCSLPSNLPCSCCSHAPQPSLGPSAGYQQHHSPHHSMG
PASTHNPDMMTYYPPCYPNYGTPMYPVSMHQYSHPSDFQQQGRVHRSQQTFWSDPFGTYP
QTLHSIAQVEQQRHWPPARTQPSPHGEGREREDGREREDVRKKLLAIFNGRLVDRAMNMF
PHLMDPQRLVAEILTLRSSQGL
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgcacccgagtggcacccaatgctctgccccagaggagagcggcaagaccgccacagac
cctggagaggctcaactggacttctaccgtaaactgggctactccccagcgcaggtccag
accgtgctgcagaagtttggcctgaacacagacactaacaggattctgggggagctggtg
cagactggagccagcccagaaggaatggagaaggagggagccccaactaccatgtctgtc
ctgattgccagtggggagacccttagtagcctgcccctcacccctccatcaatttgggag
gaggcagccagtgaggagggagatgacctgaaacccatagtgatcgatgggagtaatatg
gctatgagccacgggaacaaggaagtgttttcctgcctgggaatccagctggctgtgaac
ttcttcctggacaggggtcatactgatatcactgtgtttgttccctcatggaggaaggag
cagcccagaccagatgtccccatcacagatcaacacattttgcgtgagctggagagaaag
aaaatcatggtgttcaccccttcacggcgtgtagcgggcaaacgtgtggtctgctacgac
gatcgcttcatcgtcaagctggcgtacgagtcagatggtgtcatcgtgtccaacgacaca
taccgtgaccttcagggcgagagacaggagtggaagcgcttcatcgaggagaggctgctc
atgtactcgtttgtcaatgacaagttcatgccccctgatgaccccctgggtcgccatggt
cccacactggagaactttctacggaaggttcctcggttaccacgcaaacagccatgtcct
tacggaaggaaatgcacttacggaataaagtgtaaattctaccacccggagcgagtcaac
caatccaatcgctctttggctgatgagctgcgggagaatgccaagctgcccttgtcacca
cagaaacaccccaccacaggtcctggacttgcctatggcctttccctggaggaggagatg
gctcagaaactgaccctagaacagtggaagggctccttgaagaaaggcctcaccactgag
aatgttcttcttctcaagggaggccatcgcgccagctggaggtccccagctaaggccagc
accaaccgacattccccaaccgacctggactcagccctggccagtggctctcaagagagg
ctagattctgggctgggctccttcgagagccaggcatctgacccctctagaaaccacttt
gatcactatggcaacgctgggtacaggaaatgccagtcacagtccgcccccagtatgaaa
caacaacgctgttctctccctagcaacctgccttgtagctgctgctcccatgctcctcag
ccttcactgggccccagtgcaggataccaacaacaccacagcccacaccatagcatgggc
ccagccagcacccacaacccagacatgatgacctactaccccccttgttaccccaactat
ggaacaccaatgtatccagttagtatgcatcagtacagccaccccagtgacttccaacag
cagggcagggtccaccgttcacagcagaccttctggtcggacccgttcgggacttatcct
cagactctccatagcattgctcaggtagagcagcagagacactggccccctgcccggaca
cagccgagcccccatggggagggcagggagagggaggacggcagggagagggaggatgtc
aggaagaagctgctggccatctttaacggccgtctggtggacagggccatgaacatgttc
ccccatctcatggacccacagagactggttgctgagatcctcaccctgagatcctctcag
ggcctgtga

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