Salmo trutta (river trout): 115175615
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Entry
115175615 CDS
T08542
Name
(RefSeq) zinc finger protein 40-like
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115175615
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115175615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_16
NOA36
Motif
Other DBs
NCBI-GeneID:
115175615
NCBI-ProteinID:
XP_029590852
Ensembl:
ENSSTUG00000040056
LinkDB
All DBs
Position
36:20539452..20625330
Genome browser
AA seq
2683 aa
AA seq
DB search
MPRTKQNNPKNLKDKIEEAQNELKDTKAGAQKGINEGGRRSADNIKALKRKKVVSENQLK
KIPKSPVKKSLQSKTSVATLQATSSKEAAPSCSYPNSPSQNPASSPSQNRDTEYVQPNAE
SSEGVTSSIDNDRLKQRETSFSKPQSLDPISGKEESVSGVGESQQLKDSKSGETSCEGAS
PYHASAPLEVLLKAMEPDFSSLAEKKKSFPVTAVEKPSRTLSAQSNSEVNAMPAIHFGLQ
TQPAHMQNDFVNTQETYTMQSSTQAVPLQTLQHAKQHFSNCGEKSGLQMSFSTGSSDTLT
HSPVPSGSNFLPQSQPPVVHTCQSLSASVPSTIQVPVTPGYNPVQMATVVNFGLEQMCSI
SAKDQKPKKQGKYVCEYCSRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHK
KSHAHAIKLGLVARSDSGSGSLSVESDKALGTHSDVEESGDSDEESSTADLDPDSSQSSV
AAFSESSLQSAGTTQGNHGDAGDPSAVFPLSQRGYESKGTAGLPKVVVYPVNVSPQRADS
PRVTDSSPEQATAQRQKDFQTAHLRSSITVLSSLKEVDCTSPLQDAGSEDEDQQCRTPPG
GGHGQLQRQQATDFSQQQQGKCLLSPRSLGSTDSGYFSRSESADQAMSPPSPFVKITPPT
DMDVTKNALPNLPAVVATAMHVASVEKPRVVQGQMRPPLETKALSLEERISKLISDNEAV
VDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPMARRSSSSSDIPKSPFTPTE
KCKPVFLLSVPNQYTPMDCLPITRSNSMPTTPGHSGLPPNIVQQPHPLRICQSVDDKISS
LNDDVFSSAPSTPNPAIHSRTLVRQVAVEDFSTSEGLTSVRSMDEGYHGSSISTELMQRS
RSFEHAQDRNRKPLQSKGTMYECETCRNRYRKLENFENHKKFYCSELHGPKNKPVSVRET
EQDVFQHVMQQPLVPRTVISGIMDQQQSIRKRRKMKSVGDDDDQSPTDTNPPCSVSFDSC
QLSTASSGRPFSQHSIMVDLQPKSNPPQITQNQLVARGTDASESRLSPIRETQVNTSGKE
RGDLQRQGSGTSVIRHTNSLSKPNSFETSESIDRASPVDFMYKDGHSTGKTKADATANLS
LESYHEKMSIPKCADQGKQGMENRVDSTLAAVAESCAAVQQSRLVRQNNIPEILVTEEPD
REHDSQSTEQGEKVADTFNWPQRSESLSKLPTEKLPPKKKRIRLAQMEHSSGESSFESSL
SRSLSRDSSLSRCSSISASFDRDEPSRSESPSRGEFVNKISEPQGLPIAFNTLGVPGMIR
RAASEQISCTQPSVEILCDYRSKSFDFGSVSPSRSLPPNRSMSPMELPTSAQAFPSVQVP
LIERRRGPLVRQMSLKIGPESQQHVGRHAIPLQRLPTVFSTSQQRPQQTANKPPLAQPFI
VHSGETLPQKNERMVQSINLGSQGQLPQVHGLPHPWHLTSRVQTCQNIQQSVVHVVVGQE
DAQNKSADSQDKKSFVPKYQLQCPALRPSQTYSLSTTQGTQTTLPVLAIPIANQMQSISK
SSDVLHNVCVAQPCFQIVGNKTQSIVLPVSLQNDPPSQNLPGALQLPQILITHEQMHPSL
SVASNLYVVDTDTKTVPEMNKDRPPASTGLQVKHGLVSNTQNHIGEIQRAPSLGSLHCTQ
KMAAVTLCPQQEPIASSKRMLSPANSLDIAMEKHQKRAKDEHGAACLTDGRSVNYLNSKM
AEVTRQRKLMLVRQVCTTEPVDSPIETEAPPLQHEKPVGEKDAQTPKNCKTMTPESTGKD
EPSSVVPQEQPRSALNTAPGSHVSSSVPANASLKPQDKSEEERWSPAKSPIRPSTFHGQV
KLASSVSVVNTRDSHRLSFPSLKTATTFTWCYLMKRRPLHVPQTDQKVSAYSTWAVSPNN
PNPLGLPTKVVMSLFDSKQNSKKIHYTEAITTSMKSDILAYSSKLKDVMPKVLKPQKSVT
TENNSKVQPESQVSSESDKDSSSSKIEPRRVKIFDGGFKSNEDYVYVRGRGRGKYICEEC
GIRCKKPSMLRKHIRTHSDVRPYHCTHCNFSFKTKGNLTKHMKSKAHSKKCMEMGVSAGL
EDHDTEDSGDHSQVGTADRPDSDGEDSEGADDDNDDDNEEEEEDSQAESGLSTNPSVSAS
PQHIPSSLQAELPPSSLLAQMSIHHHRQAPLSLPQLPGSDSHTHDASDTESVPMLSPVSL
VKQMSISGGCSSPGPPPYSPPPHTSDTESVHMMSPVSPCRQMSIDYPDFEVPPSPPAPGK
GCSKLGQDGSLAPPTLPTSEPGVPIGTDVSTQTTSFTPQTSSYSPLHFPSQVSTQGSGAT
QGTHTHLFSHLPLHSQQPSCSSYSMVPVGGIQLVPAGLPAYSTFVPIQAGTVQLTIPAVS
VIHRNTSPLPLPFPKSSHSPQPEGSPLTPTNQPLVVQEPISSIMPCFPLGQVTGLQALGT
SQQTLQSMGLETLNVMGLTSSGGLTLNATLDLQVLTASPSSQSSTGPHHHHTHHTPIPGL
QILNIALPALIPSLSPLSALSPLPGPSERQGSPEAQGATRLSSQTELGPLVSCPSAASSS
PAATLRGSPTQEVTSGSRPSSSGHRSSGGSDHTQTPGKEGRVTTSLPQPSTAAAPGGGVE
RAGGSSEPVTPQRQSMLSRQQVTEDFIDDSASSDDEDRLVIAT
NT seq
8052 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaccaagcagaacaacccgaagaaccttaaagataaaatcgaagaagcacag
aatgaactgaaagataccaaagctggcgcacagaaagggatcaatgagggtggtcgaaga
agtgcagataacataaaggcattgaagaggaaaaaggttgtgtcagaaaaccagctaaag
aaaatacccaaatctcctgtgaagaagtccttgcagtccaagacctccgtggcaacactc
caagctacctcgtccaaggaagccgcaccctcttgctcctaccccaacagcccttctcaa
aaccctgccagctcaccaagccagaaccgagatacggagtatgtccagcctaatgctgaa
tcctctgagggagtgacatcctccattgacaatgataggctaaagcagagggagacgtcc
ttctcaaagccacagtctctcgatcccatcagtggtaaagaggaatctgtctctggtgtt
ggggagtctcagcagctcaaggacagtaagagtggcgaaacaagctgtgaaggtgcctct
ccttaccatgctagcgctccccttgaagtcttgcttaaggctatggaaccagacttcagc
tccttggcagaaaaaaaaaaatcctttccagtcacagccgttgaaaaacctagccgaact
ctttctgctcagtctaatagtgaagtaaatgctatgccagctatacattttggactccaa
actcagcctgcgcatatgcagaatgactttgtaaatacacaagagacctacacaatgcag
tcctctacccaggctgttcccttgcagactttgcagcatgctaaacagcatttcagcaac
tgtggggaaaagtctggcttgcagatgagcttcagtactggctcctccgataccctaact
cattcacctgttccctcaggctccaatttcttgcctcagagccagccaccggtggtgcac
acatgccagtccctatcggctagtgtccctagcaccattcaagtccctgttacacctggt
tacaacccagtccagatggccacggttgtgaactttgggcttgaacagatgtgtagcatc
tcagcaaaggaccagaagcctaagaagcaggggaagtatgtgtgtgaatactgcagtcgg
gcatgtgcaaagcccagtgtgttactcaagcacatcaggtctcacacaggagagcggccc
tacccgtgtgttacttgtggcttctcattcaaaactaagagcaatttgtacaagcataag
aaatcccatgctcacgcaataaaactggggcttgtggcgcgttccgactctggaagtggg
tccctctccgtggagtctgacaaagcacttggaacacattcagatgtggaggaaagtggg
gacagcgatgaggaaagtagcacagcagacctggaccctgactcgtcacaaagcagtgtt
gcagcgttctcagagagcagtttgcagagtgcaggcacaacacaaggcaatcatggggat
gcaggggacccatcagctgttttccccctgagtcagaggggctatgagtccaaagggaca
gctggcctcccaaaagtggtcgtctatcctgtcaatgtctcccctcagcgggcggacagt
ccaagagtcacagactccagccctgagcaggctactgcccagcggcaaaaggacttccaa
acggcacatctgagatccagcatcaccgtcctgtcatccttgaaagaggtggattgcaca
agccccctacaggatgcaggaagtgaggacgaggatcagcagtgcaggactccaccagga
ggcggacatggtcagcttcagaggcagcaagccacagacttttctcagcagcagcagggc
aagtgtctgcttagtccccgcagtttaggcagcacagactctggttacttctcacgttct
gaaagtgcagaccaggccatgagtcccccgagtccctttgtcaaaataaccccaccaaca
gacatggatgtcaccaaaaatgcacttcctaatctccctgcagtggttgccactgccatg
catgtggcttctgtggagaagccccgtgttgtgcaaggacaaatgcgtcctccattagaa
acaaaagcactctctctcgaggaacgaatctcaaagttaatatcggacaatgaggcagtg
gttgacgacaaacaattggacagtgtcaaaccaagaaggacttctctttctaggagaggt
agcatagactcccccaaatcgtatatatttaaagactcttttcagtttgaccttaaacca
atggcgagaaggtcaagttccagctcagacatacccaagtcccccttcacccccacagaa
aaatgtaagccagtatttcttctatctgtacccaatcagtatacaccaatggactgttta
ccaataacaagaagtaattctatgcccacaactccagggcactcgggtctcccaccaaac
attgtccagcaaccccacccactacggatctgtcagtctgttgatgacaaaattagttcc
ttaaacgatgatgtgttttcatctgccccctctaccccaaatccagcaatacattctcgt
actcttgtacgacaagtagcagtggaggatttctccacaagtgagggccttacctcagtc
cgttccatggacgaaggttaccatgggtctagcatctccactgagttaatgcaaagaagc
aggtcttttgagcatgcacaagaccgaaaccgaaagcctctgcagagcaaaggcacaatg
tatgaatgtgagacctgtcgcaatcggtaccgaaaactagaaaactttgaaaatcacaag
aaattctattgttcagagctccatggtccgaaaaacaagccggtatctgtcagagagact
gagcaggatgtttttcaacatgtcatgcagcagccgttagtccccagaaccgttatttca
ggtataatggaccaacagcaatcaattagaaaaagaaggaaaatgaagagtgttggtgac
gatgatgaccaatcaccaactgacaccaatcccccatgctctgtcagttttgattcttgc
caactatcaacagccagttcaggtcggccattttctcagcactctatcatggttgatcta
cagcctaaaagcaacccaccgcaaataactcaaaatcagctagtagcaagaggtacagat
gcatcagaatcaagactgtcaccgatcagagaaacccaggttaacacctctggtaaagag
agaggcgacctacagaggcaaggcagtggtacatcagttatcagacacaccaactcttta
agcaagcccaattcctttgagacctctgaatctattgacagggcctctcctgttgatttc
atgtacaaagatggccatagcacaggaaaaactaaggccgatgctactgccaatctttca
ttagagagctaccatgaaaagatgtccattcctaaatgtgccgaccaggggaaacaaggg
atggaaaaccgtgtcgacagcacattagcagcagtggctgagagctgtgctgctgtccaa
cagtctcgtctggttcgccaaaataacattcctgaaatcctggtcacagaggaacccgat
cgggagcatgacagtcagagcactgagcaaggggaaaaggttgcagatacattcaactgg
ccccagaggagcgagagcctgtccaaactaccgacagaaaagcttccacccaagaaaaag
agaattcgtctggctcagatggagcactcctctggagaatcgagcttcgagtcttcactg
tctcgtagcctcagcagagacagtagcctctcaagatgctccagtatctcagcctccttc
gaccgggatgagccatccaggtcagagagcccctccagaggagaatttgtcaacaaaata
tctgagcctcaagggctaccaatagccttcaacaccctgggggtccctggcatgataaga
cgtgctgcctcagaacagatcagttgcactcaaccctcagtggagattttgtgcgactat
cgcagcaagtcctttgactttggcagtgtgtctcccagcaggtctctgccacccaacagg
tcaatgtcaccaatggaactgccaacgagtgctcaagccttcccgtctgtacaggtacct
ctcattgaaaggcgaagggggcccttggtacgccagatgtctttaaagattgggccagag
agtcagcaacatgtcgggaggcatgccatacctctccagaggctccccactgtattctct
acatctcagcagaggcctcaacagactgccaacaagcctccccttgcccaaccctttatt
gtgcattctggagaaactctccctcagaagaatgaaagaatggtgcaaagcattaacttg
ggcagccaaggtcaactgcctcaagttcatggccttccacacccttggcacctaacatcg
agggttcagacatgccaaaatatacagcaatctgtggttcatgtcgtggtcggccaagaa
gatgcccagaacaaatctgctgactctcaagacaagaaaagctttgtgcccaaataccaa
ctgcagtgtcctgctctgagaccaagccaaacatactctctctctacaacacagggtact
cagacaactttgccagtcttagcaatacctattgccaatcagatgcaaagtatttcgaag
tcttcagatgttctccacaatgtctgtgtggcacaaccgtgttttcagattgtaggcaat
aagacacaatcaatagtcttgcctgtaagcctacaaaatgacccaccttctcaaaaccta
ccaggtgctctccaattgccacagatactgataactcatgagcagatgcacccttccctc
tctgtggccagtaacctgtatgttgtagatactgacacaaagactgtaccagaaatgaac
aaggacaggcctccagcatctactggccttcaagtaaaacacggtttagtttccaatacc
cagaaccatattggtgaaattcaaagagctccctccctggggtccttacactgcacccag
aaaatggcagctgtgaccctttgcccacaacaagagcccattgcctcaagcaagagaatg
ctctcccctgccaacagcttggatatcgccatggaaaaacatcagaagcgagcaaaggat
gaacatggtgccgcatgcctcactgatggcaggtcagtcaactacctgaactccaagatg
gcggaggtaactaggcaacggaagcttatgctagtccggcaggtgtgcaccactgaacca
gtggatagtcccattgaaactgaggcccctccactgcaacacgagaagccagtaggtgaa
aaggacgcccagactcctaagaactgcaagactatgacacctgaaagcaccggaaaggat
gaaccatcttctgtagttccccaggaacaaccacgctctgcattaaacaccgctccaggg
agtcatgtctcctcctctgtgccagctaacgcctccctgaagcctcaagacaagagcgag
gaagagagatggtctcccgccaagtctcccattaggccctcgactttccatggacaggtg
aaattggcctcatctgtatctgtcgtcaacacacgagacagccatcgcctgtctttcccc
agcctgaaaactgccaccaccttcacttggtgttacctgatgaagaggaggcctctgcat
gttccccagacggaccagaaggtttcggcctactccacctgggcggtgagccccaacaac
cccaacccactgggcctgcccaccaaagtggtgatgtctctctttgactccaagcagaac
tccaagaaaatacactacacagaagccataacgacaagtatgaaatccgacatcttggcc
tattcaagcaagctaaaagacgtcatgcctaaggtcctaaagcctcagaaatctgtaaca
actgagaataacagcaaagtgcaacctgagagtcaggtgagcagcgagtcagacaaggat
tcttcctcatccaaaatagagccacggagggtcaaaatatttgatggaggattcaaatct
aacgaggattatgtgtatgtgcgtgggcgtggtcgtggtaaatacatctgtgaggagtgt
gggatccgctgcaagaagcccagcatgctgcgtaaacacatccgcacccactctgacgta
cggccctaccactgcacccactgcaacttctccttcaagactaaagggaatctgaccaag
catatgaagtccaaggcccacagtaagaagtgcatggagatgggggtgtctgcaggcctc
gaggaccatgatacagaggactcaggagaccatagccaggtgggcactgcagaccgccca
gattcagacggagaggactcggagggcgctgacgatgacaacgatgatgacaacgaagaa
gaggaagaggacagccaggctgagtcgggcctgtccaccaacccctcggtctcggccagc
ccccagcacataccctcctccctccaggctgagctccctcccagctccctccttgctcag
atgtccatccaccaccaccgccaagctcccctgtccctcccccaactccccggctccgac
tcccacacccacgacgcctcagacacagagtctgtgcccatgctgagccccgtctccctg
gtcaagcagatgtcaatctccggagggtgttcaagccctggccccccgccctactcccca
cccccccacacctccgacactgagtcggtgcacatgatgagccctgtctcgccgtgcagg
cagatgtccatcgactaccccgactttgaagtgccccctagtcctccagcaccaggcaag
ggctgctccaaacttggccaggatggctctttggctcctcccaccctgccaacgagtgag
ccaggtgtccctatcgggacagacgtcagcactcagaccacctctttcaccccccagacc
tcctcctacagccccttgcactttccctcccaggtctcgacccaaggatcaggggccaca
caggggacacacacccacctcttcagccacctgcctctgcactcccagcagccctcttgc
tcctcctacagcatggtccccgtggggggcatccagctggtgcctgctggcctgccagcc
tactctacctttgtgcctatccaggccggcactgtccagctcaccatccccgcagtgagt
gtcatccaccggaataccagtccactcccactcccattccccaaatcctctcactccccc
cagcctgagggctctcccttgacccccaccaaccagcccctggtggttcaggagcccatc
agcagtatcatgccctgcttccccctggggcaggtcaccggcttgcaggcccttggtacc
tcccagcagacgctgcagtccatgggtctggagaccctcaacgtcatgggactgaccagc
tcaggaggcctgacgctcaacgccaccctggacctgcaggtcctgactgccagccccagc
tcccagagcagcacgggccctcaccatcaccacacccaccacacacccatccccggcctg
cagatcctcaacattgccctgcccgccctcatcccctcgctcagccctctctccgccctc
agtcccctccctggaccctctgagaggcagggcagccctgaggcacaaggggccacccga
ctctcctctcagactgaactaggacccttggtcagctgtccgtctgctgcatcatcctct
cccgctgccaccctgagaggaagtcccacccaggaagtgacatcaggcagcagacccagc
agctctgggcacaggagctccggaggctctgatcacacgcagactccagggaaggaaggg
agggttacaacatctctaccacagccctccacggctgcagctcctggggggggtgttgag
cgggcagggggatccagtgagcctgtcacgcctcagaggcagtcgatgctgtcacggcag
caggtgacggaagactttatcgatgactcagcatccagcgatgatgaggacagactggtc
attgccacctga
DBGET
integrated database retrieval system