Salmo trutta (river trout): 115175690
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Entry
115175690 CDS
T08542
Name
(RefSeq) thyroid hormone receptor beta-like isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115175690
04081 Hormone signaling
115175690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115175690
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115175690
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115175690
Nuclear receptors [BR:
stru03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
115175690
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PAP_central
CpXC
Motif
Other DBs
NCBI-GeneID:
115175690
NCBI-ProteinID:
XP_029590989
Ensembl:
ENSSTUG00000047585
LinkDB
All DBs
Position
36:23957942..24108855
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AA seq
416 aa
AA seq
DB search
MSEQGDKCTTPRWKHEAMQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRT
IQKNLNPTYACKYEAKCIIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEE
NRERRRKEELQKTVWDRPEPSQEEWDLIRMVTEAHMSTNAQGNHWKQKRKFLVEEAMLLN
EITCNLFYTSDQSAVGVKETKPEDIGQAPVINAPEGSKVDIEAFSQFTKIITPAITRVVD
FAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGG
LGVVSDAIFDLGLSLSSFHLDDSEVALLQTVILLSSDRPGLTSVDRIERCQEEFLLAFEH
YINYRKHKVAQFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFED
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaaggagacaaatgcaccaccccccgctggaaacatgaggccatgcaaaat
gggtacatccctagttacctggacaaggacgagttatgtgtggtgtgtggggacaaagct
acaggatatcactatcgctgtatcacctgtgaaggatgcaagggtttcttccggcggacg
atccagaagaacctgaacccaacgtacgcgtgtaagtacgaggcgaagtgcatcatcgat
aaggtgaccaggaaccagtgccaggaatgtcgcttcaagaagtgcatcgctgtcggcatg
gcaacagacttggtgctggacgacagcaagcggctcgccaagcggaagttgatcgaggag
aaccgtgagcggcggcggaaggaggagctccagaagacggtgtgggaccggcctgagccg
tcccaggaggagtgggacctgatccgcatggtcaccgaggcccacatgtcaactaacgcc
cagggcaaccactggaaacagaaacgcaagttcttggtcgaggaagcaatgctacttaat
gaaataacatgtaatttattctatacttctgaccagagtgcagtgggggtgaaggaaacc
aagcccgaggacattggtcaagcgccggtcataaatgcacctgaagggagcaaagtggac
atagaagccttcagtcagtttacaaaaattatcacccccgccattacccgagtggtggac
tttgccaaaaagctgcctatgttctgtgagctgccttgtgaagaccagattatcctattg
aaaggctgctgcatggagatcatgtctttacgggcggccgttcgctacgaccccgagagc
gagacgctgacgcttaacggagagatggccgtgacccgcggccagctgaagaacggaggc
ctgggtgtggtgtcggacgctatctttgatttgggcttatcgctgtcttcgttccacctg
gacgactctgaggtcgctctgctacagaccgtcatcctcctgtcctccgaccgtccgggg
ctgaccagcgtggaccgtattgagcgctgtcaggaggagttccttctggcctttgaacat
tacatcaactaccgcaaacacaaggtggcgcaattctggcccaagctgctgatgaaggtg
acggacctgcggatgatcggggcgtgccacgcctcccgcttcctgcatatgaaggtggag
tgccccaacgaacttttccccccactcttcctagaggtctttgaggactga
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