Salmo trutta (river trout): 115175821
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Entry
115175821 CDS
T08542
Name
(RefSeq) myocyte-specific enhancer factor 2D homolog isoform X1
KO
K09262
MADS-box transcription enhancer factor 2D
Organism
stru
Salmo trutta (river trout)
Pathway
stru04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
115175821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115175821
04131 Membrane trafficking [BR:
stru04131
]
115175821
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
115175821
Membrane trafficking [BR:
stru04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
115175821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
115175821
NCBI-ProteinID:
XP_029591212
Ensembl:
ENSSTUG00000014448
LinkDB
All DBs
Position
36:complement(30033134..30068530)
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AA seq
578 aa
AA seq
DB search
MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST
DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCESPEPDGEDSIDQIPLSDDKYRKT
TEDLDILFKRYGVSSAVPPPTFSMPVTVQASNQNTLQFSNPGNAMVTTSYVTSPSLSDNH
HLSPQQPAPQRNTVSPGLPQRPASAGAMLGGDLNNSNGGCPSPVPNGYISARASPGLLSV
SNGNSLGKVVPAKSPPPPQSPQMVNSRKPDLRVITSQGGKSLMQMTDDELEMVNENAQRL
AGAQVAQALTTPVVSVTTPSLLAQGLPFSAMPTAYNTEYQLTSADITALHALASPGGLLQ
GNLSWQQQPSLSQQQQQQQQQQLSLASLSNLVMWGMDKQSGDLSSQISSLAANLSASQSN
LLLGRDEWLGRPVGHIPQGTMLTVNTNSNMSIKSEPISPGRDRRSPCPPPSSSGGGVQTA
APPPQYPGSLLCLEPPTGRSPADSLSSNGSSYEGNDRDDPAAGGGGGGIGGSAAGNMGNP
GRSLPPEFSPSVELLRAQNEAEQEGANIKRMRLDAWVT
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaaaaagattcagatccaacggatcaccgacgagaggaacagacaggtgacg
ttcaccaagagaaagtttggcctgatgaagaaggcgtacgagctgagtgtgctgtgtgac
tgtgagatcgccctcatcatcttcaaccactccaacaaactgttccagtacgccagcacc
gacatggacaaggtgctgctcaagtacaccgagtacaacgaaccccacgagagccggacc
aacgccgacatcattgagacgttgcgaaagaaaggcttcaacggttgcgaaagtcccgag
ccggacggagaggactccatagaccagatccccctgagcgacgacaaataccgcaagacc
accgaagacctagacatcctcttcaagcgctacggtgtcagttctgcggtcccacccccc
acattttccatgcccgtcaccgtccaggcctctaatcagaacacattgcaattcagtaac
cctggcaacgccatggtgaccacctcctacgtgacgtcgccatcgctctctgacaaccac
cacctgtcgccccagcaaccggcgccccagagaaacacagtgtctcctgggttgccacag
cgaccggccagtgcaggtgctatgctcgggggcgacctgaacaattcaaatggaggatgc
ccaagtccagtccctaacggatacatcagtgccagggcctccccaggcctcctctctgtc
tccaatggcaacagcctggggaaagtagttccggccaagtccccgcccccgcctcagagc
ccacagatggtcaacagccgcaagccagacctccgggtaatcacctctcagggtgggaag
agcctgatgcagatgacagatgatgagctggagatggtgaacgagaatgcccagcgtttg
gccggcgcacaagtggcccaggcgctcaccacgccggtggtctccgtgacaacgcccagc
ctcctggcgcaggggctgcccttctccgccatgccgacagcttacaacacagaataccag
ctgacgagcgctgacatcaccgctctccacgccctggcgtcaccaggcggcctgctgcaa
ggcaacttgtcgtggcaacagcaaccgtctttatcccagcagcaacagcagcagcaacag
caacaacttagtctggcgtcgcttagcaacttggtcatgtggggcatggacaaacagagc
ggggacctgtctagccagatctccagtctggcggccaatctgagcgcctcgcagtccaac
ctcctcttgggtagagatgagtggttgggccggccggtggggcacatacctcagggcacc
atgctgactgtcaacaccaactccaacatgagcatcaagtctgagcccatctcgcctggc
cgagaccgccgctccccgtgccccccgccgtcctcctccggggggggcgtccagacggcc
gcgcccccgccacaatacccaggttccctgctgtgcctggagcccccaaccggccgctcc
cccgccgatagcctcagcagcaatggcagctcctacgagggcaacgaccgcgacgaccct
gcggcaggcggcggcggaggaggcatcggcggaagtgcagcgggcaacatgggcaaccct
ggccgttccctgccccccgaattcagcccctcggtggagctcctgcgggcccagaatgag
gcggagcaggagggagccaacataaaacgcatgagactcgacgcgtgggtcacatag
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