Salmo trutta (river trout): 115175895
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Entry
115175895 CDS
T08542
Name
(RefSeq) tenascin-X-like isoform X1
KO
K06252
tenascin
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115175895
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115175895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
stru00536
]
115175895
Glycosaminoglycan binding proteins [BR:
stru00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
115175895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
Fibrinogen_C
EGF_Teneurin
fn3
EGF_2
EGF_Tenascin
hEGF
EGF_PEAR1L
EGF
FN3_Tor_3rd
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_integrin
Big_5
Ig_J
Motif
Other DBs
NCBI-GeneID:
115175895
NCBI-ProteinID:
XP_029591377
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All DBs
Position
36:complement(32176088..32204182)
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AA seq
1173 aa
AA seq
DB search
MPLVPSFLILLLTCPALLTPSGSQSLQPGGQRAPRDTKPEGGGQPIKVVISEACVQGDSS
QTQGKELDLEPGSDLVLTHRIRLVPGSCAGGCEAEFAALRDRLERLEKEVSSLREKCGGP
EGGCCTSQQSKGAECSIKPEGDECPNECSDQGRCEDGKCVCFPGFSGPDCSLSDCPGNCN
DKGTCVNGQCVCDPGFTGPDCSSESCPGNCNNKGRCVNGQCVCDPGFTGPDCSSESCPGN
CNNKGRCLNGQCVCDPGFTGPDCSSESCPGNCNNKGRCVNGQCVCDPGFTGPDCSSESCP
GNCNNKGRCLNGQCVCDPGFTGPDCSSESCPGNCNNKGRCVNGQCVCNTGFTGPDCSTKA
CPGNCKNGGKCVNGKCVCDSGFTGPDCSTKSCPGNCSNRGKCVNGQCVCDRGFTGPDCSA
KACPNNCSNKGRCVNGKCVCEVGFSGQDCAAKGCPDNCSNKGRCVKGRCVCRRGFAPPDC
SQCEAGFTGADCGTAMSGVSQLNTKDITESSVTLYWTPPPVQYDTYHITFTSQKEGDQQI
TSQVGGKLTAFTQTGLAAGQEYTVTIRGEINRRMGTESTVEFTTLISGPTNLRVVKTTTT
SAVVQWDQSQGDIDRYRLTVAPNQTDGTAKGRQDLTLPPERDSAQIDSLDPGHLYDITLV
AEKGGIKSKPATVQVTPGPEPPSGLVFSEVTETSLSVSWTKPKSPVSGFKVTYTHTQEGE
PLSAAVDSGDSTLALSKLSPGSSYEVSVISILGLDESDAIKDLVMTLPDPPRDLRAINVT
DTKALLLWRPALATVDRYVIVYGTVKGSDDAKITVSGNAAEQQLKGLQGSTMYTVTVTSQ
LGNLDSSAAITAFTTTGGSRGDGEVPRDLKASQVTPRSALLTWKAPSAAVGSYKLTYQTE
GQEKQEVTIDSTVTEFKLTRLHPMSKYTVQLQGERGGSYTATISTEFTTGNLRYPFPSDC
SQELLNGIRESGEVEIFPKGRQGKPVLVYCDQVTDGGGWTVFQRRMDGKTDFFRGWKNYS
KGFGELSGEFWLGNENLHNLTSMAPMTLRVDLRAGDESVFAKYSAFTVDTVRRNYALKVS
GYSGTAGDSMSYHNGRMFSTRDRDPMPFITRCAMSYKGGWWYKNCHEANLNGLYDTSVNH
QGVIWTAWKGKDLSIPFTEMKLRPTSFTPPTQG
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttgtcccatccttcctcatcctgctcctcacctgccctgccctcctgacccca
tcaggttcccagagcctgcagcctgggggtcaaagggcacccagggacacaaagccagag
ggtggcgggcagccaatcaaagtagtgatctctgaggcgtgtgttcagggggactccagt
cagacccagggcaaggaactggaccttgagcctggttctgatctagtccttacccatcgg
atccgactggttccggggtcgtgcgcaggcgggtgcgaggccgagtttgctgccctgcga
gaccgtctggagaggctggagaaggaggtgtcgtcattgagggagaagtgtggaggccca
gaggggggctgctgcacatcccagcagagcaaaggtgcagagtgctccatcaagccggag
ggagacgagtgtcctaatgagtgcagtgaccagggacgctgtgaggacggcaagtgtgtc
tgcttcccaggattcagtggacccgactgcagtttgtctgactgccccggcaactgcaat
gacaaggggacgtgtgtgaacggccagtgtgtgtgtgacccaggtttcacagggccagac
tgctcttcagagtcctgtcctggaaactgtaacaacaaggggcgatgtgtgaacggccag
tgtgtgtgtgacccaggtttcacagggccagactgctcttcagagtcctgtcctggaaac
tgtaacaacaagggaagatgtctgaacgggcagtgtgtgtgtgacccaggtttcacaggg
ccagactgctcttcagagtcctgtcctggaaactgtaacaacaaggggcgatgtgtgaac
ggccagtgtgtgtgtgacccaggtttcacagggccagactgctcttcagagtcctgtcct
ggaaactgtaacaacaagggaagatgtctgaacgggcagtgtgtgtgtgacccaggtttc
acagggccagactgctcttcagagtcatgtcctggaaactgtaacaacaagggaagatgt
gtgaacgggcagtgtgtgtgcaacactggcttcacaggcccagactgctccaccaaggca
tgtcctggaaactgcaaaaacggggggaagtgtgtgaacggtaagtgtgtgtgtgatagc
ggttttacaggcccagactgttccaccaagtcctgccctggcaactgcagcaaccgtgga
aagtgtgtgaacggccaatgtgtctgcgatcgcggctttacggggccggactgttccgcc
aaagcatgtcccaataactgcagcaacaagggaaggtgcgtgaacgggaagtgcgtgtgt
gaagtgggcttcagcggacaggactgcgccgctaagggctgtcccgataactgcagcaac
aaagggcgctgcgtgaaggggaggtgtgtgtgtcgccgtggtttcgcccccccggactgc
agccagtgtgaagctgggttcactggagctgactgtggcaccgccatgtctggtgtgtcc
cagctcaacaccaaggacatcactgaatcctctgttaccctctactggaccccacctcca
gtccagtatgacacctaccacatcaccttcaccagccagaaagagggcgatcaacagata
acatctcaagttggagggaagctcacggccttcacccaaacaggactggcggccgggcag
gagtacacggtgacgatcaggggagaaataaataggagaatgggcactgagagcacagta
gaattcacaacccttatctctggacccacaaaccttcgagttgtgaagacaaccacaaca
tctgccgttgtccaatgggatcaatcgcaaggagacatcgataggtatcgcttaactgtt
gcacccaatcagacagacggaactgccaagggaagacaagacctaaccctgccccctgag
agggactctgcccagattgacagtttggacccgggacatttgtatgacatcacgttagtg
gctgaaaagggcgggatcaagagcaagccagcaacagtccaagtcactcctggtccagag
cctccctcaggtcttgtcttcagtgaagtgactgagacgtctctctctgtgtcctggacc
aagccaaaaagtccagtgagtggcttcaaggtcacctacactcacacacaggaaggggag
cctctctccgcagcggtggactctggggattccactctggcactgtcaaagctctctcca
gggtcctcctatgaggtcagtgtgatatccatccttggactggacgagagcgatgcaatc
aaagacctggttatgacactccctgaccctccgagggatctccgggccattaatgtcaca
gacaccaaggccttgctgctatggcgaccagcactggcaacagtcgaccgttacgtcata
gtttatggcactgtaaaagggtcagatgatgccaagatcactgtgtcgggcaatgcggcg
gagcagcagctgaaaggcctacagggctccactatgtacaccgtcacagtcaccagtcag
ctgggcaacctggacagctctgccgccatcaccgccttcaccaccaccggtggatccagg
ggagacggggaagtcccgcgtgacctgaaggccagtcaggtgactcctcgctcagcgctg
ttgacgtggaaagcaccctctgccgccgtgggaagctacaagctgacctatcagacggag
ggacaggagaagcaggaggttaccattgactccacagtaacagagtttaaattgaccagg
ctgcatcccatgtccaagtacaccgtgcagctacagggggagaggggagggagctacact
gctactatttccactgagttcaccacagggaatctccgataccccttcccaagtgactgt
tcccaggagctgctaaacgggatacgtgagtctggagaggtggagatcttcccaaaggga
aggcagggaaaaccagtgttggtctactgcgaccaggtgactgatggaggcggctggacg
gttttccagagaaggatggatgggaaaactgacttcttcagaggctggaaaaactacagc
aaaggttttggagaactgagtggggaattttggctgggtaatgagaacctacacaatcta
accagcatggcaccaatgaccctacgtgtggacctccgtgcaggggacgagtcagtgttt
gccaagtactctgcattcacagtggacactgttagaaggaactatgctctcaaagtgtct
gggtacagcggtacagcaggtgactctatgagttaccacaacgggcgcatgttctctacc
agagacagagaccccatgcctttcatcacccgctgcgccatgtcctataaggggggttgg
tggtacaagaactgccacgaggccaaccttaatggcctctacgacaccagtgtcaatcac
cagggtgtgatctggactgcctggaaaggcaaggacttgtccatccctttcaccgagatg
aagctcagaccaacatctttcacccctccaactcagggataa
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