Salmo trutta (river trout): 115175909
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Entry
115175909 CDS
T08542
Name
(RefSeq) retinoic acid receptor RXR-beta-A-like isoform X1
KO
K08525
retinoid X receptor beta
Organism
stru
Salmo trutta (river trout)
Pathway
stru03320
PPAR signaling pathway
stru04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115175909
03320 PPAR signaling pathway
115175909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115175909
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115175909
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115175909
Nuclear receptors [BR:
stru03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
115175909
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
115175909
NCBI-ProteinID:
XP_029591401
Ensembl:
ENSSTUG00000032635
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Position
36:32601282..32632752
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AA seq
469 aa
AA seq
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MGDSRDSRSPDSSSVSSPPSGQRSPPLTPTAAAMTSLPPFTLAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPFGLGGHSPGGPMLSQK
RLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRY
QKCLACGMKREVVQDERQRSVQEERQRNKERESEAESTSAVNEEMPVEKILEAEMAIEQK
TEVHADGSSEGSSPNDPVTNICQAADKQLFTLVEWAKRVPHFSELALDDQVILLRAGWNE
LLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEVGAIFDRVLTEL
VSKMRDMQMDKTELGCLRAIILFNPDAKGLSSSSEVELLREKVYASLESYCKQRYPDQQG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcagagattcccgcagcccagacagctcctctgtgtcctcccctccctcg
ggccagcgctcaccccccctgacccccacagctgccgccatgacgtctctgccgcccttc
accttggccgtcaacagccccatcagcagcatgggctcgcccttctctgtcatcagctcc
tctttggggtcgccatgtttgcccgggacaccctcggtgggctacggccccattagcagc
ccccagatcaactccacagtgtccatgtcgggactgcacgcggtcagcagctcggacgac
gtgaagcctccgttcgggctggggggccacagcccagggggccccatgctttcccagaag
cgcctgtgtgccatctgcggcgaccgctcctccggtaagcactacggagtgtacagctgc
gagggctgcaagggtttcttcaagcgcacggtgcgcaaggacctgagctacacctgccgg
gacaacaaggactgcctggtggacaagcgccagcgcaaccgctgccagtactgtcgctac
cagaagtgcctggcctgtggcatgaagagggaagtggtccaagatgaacgacagagatcc
gtgcaggaagagcgccagaggaacaaggagcgggagagtgaggcggagtcgaccagcgcc
gtcaacgaggagatgcccgtggaaaagatcctggaggccgagatggccatagagcagaag
acagaggtgcatgccgacgggagctccgagggcagctcgcccaatgacccggtcaccaac
atttgccaggctgcagacaagcagctgtttaccctggtggagtgggccaagagggtcccc
cacttctctgagctggccctggacgatcaggtcatcctgctacgcgccggttggaacgag
ctgctgattgcctccttctctcaccgctccatcagcgtgaaagatggcatcctactggcc
accggcctgcatgtgcacaggaacagcgcccacagcgctggcgtgggagccatcttcgac
agggagagtgcgcacaatgcagaggttggggccatatttgacagagttctcactgagctg
gtcagtaagatgagagacatgcagatggacaagaccgagctcggctgcctccgagccatc
atcctcttcaacccagatgccaagggcctttccagctccagtgaagtggaattgctgagg
gagaaggtgtacgcatcgctggagtcctattgcaaacagagataccccgaccagcagggc
aggttcgctaagctcctcctccggctgccagctctacgctccattggcctgaagtgcctg
gagcacctgttcttcttcaagctgattggcgacacccctatcgacacgttcctcatggag
atgctggaggcgccccaccagctgacctag
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