Salmo trutta (river trout): 115175914
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Entry
115175914 CDS
T08542
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru02010
ABC transporters
stru04145
Phagosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115175914
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115175914
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115175914
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stru02000
]
115175914
Enzymes [BR:
stru01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
115175914
Transporters [BR:
stru02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
115175914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
Rad17
AAA_30
AAA_25
AAA_29
RsgA_GTPase
AAA_15
Motif
Other DBs
NCBI-GeneID:
115175914
NCBI-ProteinID:
XP_029591419
Ensembl:
ENSSTUG00000033121
LinkDB
All DBs
Position
36:complement(32765380..32771054)
Genome browser
AA seq
724 aa
AA seq
DB search
MMRRTCVFTMAVGLCIDITTFCATGYGASISKTGPISFDVFGNLMRLWVEAGIRLVLLFG
LSLLTLGSIKPVLKRWLAVHCFLAPVYETGQLMLHGSSPESPNGSLGGPSLWLLCTAAAA
AAALFWEKTFPDSKEEINGKEKTQKARALFMRVLYFYRPDTLLLVGAFIFLALAVLCETF
IPFYTGKVIDILASQYKWNDFLTAIVLMGLYSLGSSFSAGCRGGLFMCAINSFTCRMKVE
LFGALVKQEISFFETIKTGDITSRLSTDTTKMARTLALNVNVLLRTLIKTVGMLSLMMSL
SWKLTLLMLMETPITGLLQGVYDNYYLRLSKEVQDSMARANEAAGETVAGIRTVRSFNTE
RSEAARYDHRLMDTHNLKTRRDTVRAVYLLLRRLTALVMQVAMLYYGRLFIQRGQMSTGN
LVSFILYQSNLGANIRTLIYIFGDMLNSVGAAGKVFEYLDREPQVSTKGTLQPETLTGHV
HFHNLSFSYPTRQERKVLQGFSLELRPGQLTALVGPSGGGKSTCVSLLERFYQPQQGEIL
LDGQPLHSYQHHYLHRKVAMVGQEPVLFSGSIKDNIAYGLADCSLERVQEAARRANAHSF
ISQLEKGYDTDVGERGGQMSGGEKQRIAIARALIREPQVLILDEVTSALDTESEHMVQEA
LASCPSQTLLVIAHRLKTIERADQIILIDQGSVLEQGTHQELMDRKGGYYKLRERLFTED
DTSH
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtagaacgtgcgtgttcactatggctgtaggtctatgcattgacataaccaca
ttttgcgccacgggttatggcgcatctatttccaaaactggaccaataagttttgatgtt
tttggaaatctgatgcgtctatgggttgaagcggggattcgattagttctactatttggt
ttatcgctactcacactaggatcgattaaaccggtattgaagcgctggttagcggtgcac
tgtttccttgccccggtctacgagaccgggcaactgatgctgcatggaagttcaccggag
agcccgaatggatcgttggggggtccaagtttgtggctattgtgtaccgcggcagcagct
gcagcagccctgttttgggagaaaaccttccctgacagcaaagaagaaattaacggaaaa
gagaagacgcagaaggcacgagcgctgttcatgagagtcctctacttctacagacctgac
accctccttttggttggagcgtttatattcctggcactggctgtcctctgtgaaacgttc
atcccattctatacaggaaaagtgattgacatcttggcttcccagtacaagtggaatgac
tttctcacagctatcgtcctcatggggctctactctttgggaagctctttcagtgcaggc
tgtcgaggaggcctcttcatgtgtgccatcaacagcttcacctgcagaatgaaagtagag
ctgtttggggccctggtgaagcaggagatcagcttctttgagaccatcaagacaggtgac
atcacgtccaggctgtccacagacaccactaagatggcccggacgttggccctgaatgtc
aacgtcttactgaggaccctcattaagaccgtgggtatgctgtcgctcatgatgagcctg
tcctggaagctcactctgctcatgctgatggagacgcccatcaccggcctgctgcaaggc
gtctatgacaactattacctgaggctctctaaggaggtgcaggactccatggccagggcg
aacgaggcagcgggagaaacagtagcaggaatccggaccgtgcgaagctttaacacagag
cggagtgaggctgctcgttatgaccacaggttgatggacacccacaatctcaaaaccagg
cgggacaccgtcagggcagtgtacctgctcctgagaagactaacagcgctggtaatgcag
gtggccatgctgtactatggcagactgtttatccagcgaggtcagatgagcactgggaac
ctggtctctttcatcctctaccagtctaacctgggagccaacatcaggactttgatttac
atatttggcgacatgctgaactcggtgggggcggctggtaaggtgtttgagtatctggac
agagagccacaggtcagcaccaaggggaccctccaaccagagaccttgactggacacgtc
cacttccacaacctctccttctcctaccccacccgccaggagcgcaaagtactgcagggc
ttctctctggagctgaggccgggtcagctgactgctctggtggggccgtcaggggggggg
aagagcacctgtgtcagtctgctggagaggttctatcagcctcagcagggagagatccta
ttggatggacaaccactgcacagctaccagcaccactacctacacaggaaggtggccatg
gtgggccaggaacctgttctattctctgggtccatcaaggacaacattgcctacggcctg
gcagactgctctctggagagggtgcaggaagctgctcgcagagccaatgcccacagcttc
atcagccaactggagaagggttatgacacagatgtaggagagcgaggtggccagatgtcc
ggtggtgagaagcagcgtattgccatcgccagagctctgatcagagagccacaggtcctc
atcctggacgaggtcaccagcgcactggacactgagagcgaacacatggtccaggaggcc
ctggctagctgcccctcccagaccctgctggtgattgctcacaggctgaagaccatcgag
agggcagatcagatcattctgattgaccagggaagtgtcctggagcagggcactcaccag
gaattgatggacaggaaggggggctactacaaactaagagagagactcttcacagaagac
gacacgtcacattga
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