Salmo trutta (river trout): 115175938
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Entry
115175938 CDS
T08542
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115175938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115175938
03021 Transcription machinery [BR:
stru03021
]
115175938
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115175938
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115175938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
115175938
NCBI-ProteinID:
XP_029591453
LinkDB
All DBs
Position
36:33267431..33310446
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AA seq
689 aa
AA seq
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MFVPLPVPFVFQRTASDFSAWRLKSPLALRSSSDIRMSKPAEDEKPGADFPGESTDSERK
SPDANDQVQPMKTSPFSLSPSLSNTKSKSEAGPEMTSTHVPPPSQQQTPHPHTQLMLAGS
QLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAAQANQQQQQQQQQLTK
QEHAQPQLTLSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPQFLLPQAQGQPGQQGKWDL
LSLLSTPNLISLPQHQQSQGSLLTTPPRLGLQAQRRHGDSLTSLQRDKSGDGGVTSGASA
APMTSVTSGPHGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTTIS
RFEALNLSFKNMCKLKPLLEKWLNDAETMAIDNMLPSPSSLSSPMMGFEGMTGRRRKKRT
SIETNVRVALERNFISNQKPNSEEILLMGKQLNMEKEVIRVWFCNRRQKEKRINPCSATP
PLPSQSPLVTHKPPCYSPHMMSSQGLHQAATSLSTTVTSPSPSATCPMTPSGSATMSSAP
SSVTPPPHSTASNAPHTLSAHSLNAGNTMMGVSTGMNQALISSNPLATMQALAASGGQLP
ISSLEAGGQMILGGAGVRPSLFLNRHTLLPMASHQACVGLVGGPRGDSPPPRASGMDVDS
CSASPCSSPASFCSFSEASPPPLGGAMAE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtctttcagagaactgcttccgacttcagcgcc
tggcgtctcaagtccccgctggctctacgctccagctccgatataaggatgtcaaaacca
gcagaggacgagaagcctggggcagactttccaggggagagcacagactctgagaggaaa
agtcccgatgcaaatgatcaggttcagccaatgaaaacgagtcccttcagtctttctcct
tccttgagcaacaccaagagtaaaagtgaggctggccctgagatgacctccacccatgtg
ccgcctccctcccagcagcagacacctcaccctcacacacagctcatgttggcagggagt
cagctggcagggctggctgccctcttgcctgcgcagcagcagctgttgcttcagcaggcc
caggctcagctcctggccgctgccgtgcagcagtccaacgcggctcacgctgctcatgcc
gcccacgcagcagcccaagccaatcagcagcagcaacaacagcagcagcagctgaccaaa
caagagcatgcccagccccagctcacgctctctcagcctatccagctcaccgcccaggat
atccagcagctgttgcagctgcagcagttagtcctgatgcccggccaccacctgcagtct
cctcagttcctcctgcctcaggcccagggacaaccggggcagcagggtaagtgggaccta
ctaagtttgctctcgacacctaatttaatttcgctacctcagcatcagcaaagccagggg
agtcttctaactactccacccaggctgggactgcaagcacagcgtcgtcacggtgacagc
ctcacgtcgttacagagggacaagagcggggacggcggtgtgacctccggggcctcggct
gcccccatgacctcggtgacctctggcccgcatggcgaggagccaagtgacctggaggag
ctggagcagttcgcccgcaccttcaaacagagacgcatcaaactgggcttcacacagggt
gacgttggcatggcaatggggaaactgtatgggaatgacttcagccagaccaccatctct
cgcttcgaggccctcaacctgagctttaagaacatgtgcaagctcaagcctctgcttgag
aagtggctaaacgacgcggagaccatggcgatagacaacatgcttcccagccccagctct
ctctcctcccccatgatgggctttgagggcatgacggggcgccgcaggaagaaacgcacc
agcattgagaccaacgtccgcgtggccttagagcgcaacttcatctcgaaccagaagcct
aactcagaggagatcctcctgatgggcaagcagctcaacatggagaaggaggtgatccgg
gtctggttctgcaaccggcgccagaaagagaagcgcatcaacccctgcagtgccacccct
cccctgcccagccagtccccccttgtgacgcacaaacccccctgctacagcccacacatg
atgtctagtcaggggctgcaccaggctgccaccagcctcagcacaacagtgaccagtcca
tcgccctcggcaacctgccctatgacccccagtggctctgcaactatgagctccgccccc
tcctctgttactccgcctccacacagcacagccagcaacgcccctcacaccctcagtgcc
cacagcctgaacgctgggaacacaatgatgggagtaagcacagggatgaaccaggctctc
atcagcagcaatcccctggccacaatgcaagctctggctgccagtggtgggcagctgccc
atttccagtcttgaggccggaggtcagatgatcctgggcggggctggggttcgcccctcc
ctattcctcaaccgccacaccctcctgcctatggcgtcccaccaagcctgcgtgggattg
gtcggcggtcccaggggcgactctccgcccccccgcgccagcggcatggacgtcgactcc
tgctccgcctctccctgctccagcccggcctccttctgctcgttcagcgaagcctcaccg
ccgccacttggcggggccatggccgagtga
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