Salmo trutta (river trout): 115175940 Help Entry 115175940         CDS       T08542                                  Name (RefSeq) protein capicua homolog   KO K20225   capicua transcriptional repressor Organism stru  Salmo trutta (river trout) Brite KEGG Orthology (KO) [BR:stru00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:stru03000]     115175940 Transcription factors [BR:stru03000]  Eukaryotic type   beta-Scaffold factors with minor groove contacts    HMG SOX     115175940 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF4819 HMG_box HMG_box_2 Zf_WRKY19 Motif Other DBs NCBI-GeneID:  115175940 NCBI-ProteinID:  XP_029591460 Ensembl:  ENSSTUG00000024169 LinkDB All DBs Position 36:33385837..33418864 Genome browser AA seq 2065 aa AA seqDB search MDSVFRAGVVRRVSGEHGSLEVQLNGEKELYCYPFREGPQGPVDIIMDAPPPGSQAVPIG TPVCVPFGGNEDGGTTKAQRQWYREGLVTQVDSHPAVSYPYRVLLEDRAPPGDEEGDGRV GTPTAVWVSRQSLRLLVPPWDLDLGPSGGGREEGNAAAERGREREREREDRDEIEVEQEL CFISHGMRLSAAVAGSVLGRLSYPGTAPASSSSSTVSSPVTPASVLSLVPGRDWEREKDL VERERKQERDNRERAKQHHHFMPLTPEEDIEVSHFSMVPMGATGGAAKALTVSQHRHILS KPPPGYLSPHLSVVRGLGGTPLVGPHLALNPHPPASPTVLMGLESGALAAGAAVIATPQL PPLPSSSSRGSLDKPPSSNANSHGAPGGGGGSGSASSSRSRTPLTAAQQKYKKGDVVCTP TGIRKKFNGKQWRRLCSREGCSKESQRRGYCSRHLSMRTKEMESSGGGRDRGGASSTGTL TPSDLRLGGGRTSSEFDWDNTSRDSSEASSRGGDSRPRMVLPSFLPQDLSHFDFDECEAA TIMVSLGSSRSGTPSYSPISNQSPFSPTPSPSPSPLLSFRPATFSPITAPPSLTPRRHRH LSGTKMSTPGSERHLSGIVPTFQTNLTFTVPMSPSKRKLDALPPPLPLPDQQLGETIGLR PATFRVLSPQSQPTTPSSLSFPRPRSATSRPPSSAASTPPPMLVSPTPPSPLPQDPSPRR IVPLRDSPVIVRNPDIPLAKFTEGPLGRRGGGGCSSRDHSQPLHLATGLQAPVPINGAAT NGAVLMRNPASTLVLVTSTQSLTPAVTGRPVHSSPAPSGGSASMSSTGSALSSSGSGGRE WERKSGGHQDAIGGTLPQPVACHPSPTALLPLILPAESPQPAPRKDIIMGRPGTVWTNVE PRSVPVFPWHSLVPFLEPSQSSAAAQPTDGQQLVNQSNEPRCGVALVSDGWVGPPDAGRG SPSRPPTSSNDNNPQAEKAERGGADSETESDADDPFFPGVANDTAPSTGTMKRRSQSLSA LPKDGDRKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPQEK QKYHDLAFQVKEAHFRAHPDWKWCNKDRRKSISEGRGTPGAKEARERSMSESAEPELVSQ GMELKGTSGPGWPGGSEHHAGAYSGQLPRPRAFSQSAVHSLERRERARDVEKLCQEGTGS FRSRPPTLSLAQCGGSEDVTSDEERMVICEEEGDDDVMEDSCPEGSIDLKCKERVTDSDE DEPDGQQAFQPVVRSSLPSSTNTSYADSHSDSTKGDTRGSDGESSERKRKRGMEGGEEGS GESKRGRGGGGHVPSNSIPGSAPNTSTPALGYGLTQVLGAVRMAPAMVTKTVCPITSMPI PIASKPMEGSITLSALPGENKATLLIGGPGAGGGPFTAGVQAQSPVLQSKMLVPMATVRT SSTPQPSSLVAPPLPVQNGALPGSKIIQIAPMPMGQTNVHSAGAVHPGSPFHVSMATATV MTPGIAPPQTVLLTSPPTRITYVQSGTGVVSTATVQAPPSPGPAYLPSSLATLGFTAIAP AGQALVHPLVAGQPPWLAPALSPGAPGTGRQHLTAIYPAQNVTLAPDVVSMTSVPANLAQ ELSGQSSRSAVGVQGSKDVTRSHEEGMPHLTAEMEHKPQVEGQAQRKTKTQIKKESIKKE KMTEDVEAHSKPGANSMGTSSSNTPTGSEENGGRASHVKEENTDDARDYAKEKQTDVDGE RERGIKMECGTPEPERSRETDDWPHEGHNKGDSGNGGHSKGAGPREPPHPPTGQDTPPPA PQTDRDAPPSAKKTKFRPPPLRKPSDSIDKALSGSYFEERFAELPEFRPEEVLPSPTLHS LATSPRAILGSYRKKRRNSTDLDSSAEDPSSPRRKTAARSRLSSCSSEPNTPKSDVKCEG DIFTFDRAGAESEDVLGGMDRGPYSSLRRTLDQRRALVMQLFQEHGFFPSAQATAAFQAR YSDTFPSKGCLQLKIREVRQKIMQTATPGTPGISELGGSTTEVPGSTDSTSAANGSSNTN TRDGTGTEPGERGRSPEEPRSLGKL NT seq 6198 nt NT seq  +upstreamnt  +downstreamnt atggactcagtgttccgagcgggcgtggtgcggcgggtgagcggcgagcacggcagcttg gaggtgcagctgaacggcgagaaggagctgtactgctacccattccgcgagggcccccag gggcccgtggacatcatcatggacgccccgccgcccggctctcaggccgtgcccattggc acccctgtgtgcgtgcccttcggaggcaatgaggacggcggcaccacaaaagcccagcgc cagtggtaccgagagggcctggtcacccaggtggactcccacccggctgtgtcctacccc tatagagtgttgttagaggacagagcgcccccaggggatgaggagggggatggcagggtg ggcacacctacggctgtgtgggtgtcccgtcagagcctccgcctgctggtgcccccctgg gacctggaccttggaccctccggaggggggcgagaggagggcaatgctgccgccgagagg gggagagagagggagagagagagagaggacagggacgaaatagaagtggagcaggagctg tgtttcatcagccatgggatgcggctcagcgcagctgtggctgggtccgtgttggggagg ctttcataccctggaacggcccccgcctcctcgtcttcctccactgtcagctcccccgtc acccccgcctcggtgctgagtctggtgcccggaagagactgggagcgagagaaggacctg gtggagagagagcggaaacaagagagagataaccgagagagggccaagcagcaccaccac ttcatgcccctgacccccgaggaggacatagaggtgtcccacttcagcatggtgcccatg ggggcgacgggaggggcggccaaggccctgacggtgtcccagcacaggcacatactctcc aagccgcccccgggctacctcagcccccacctgtctgtggtccggggcctcggaggcacc ccactggtgggcccccacctggccctcaacccccacccccctgcctcccccacggtgcta atgggcctggagtcgggagccctggcagcgggggcggccgtcatcgccacccctcagctc cctcctctgccctcctcgtcctcccgcggctccttggataagccaccctcgtcaaacgcc aactcccacggtgcacctggagggggtggaggctcaggttcggcgtcctcgtcgcgctcc cgcacccctctcacagcagcccagcagaagtacaagaagggcgatgtggtgtgtaccccc acgggcatccgcaagaagttcaacggcaagcagtggaggaggctgtgctccagagagggc tgctctaaggagtcccagagacgaggctactgctcgcgtcatctctccatgagaactaaa gagatggagtccagcggagggggcagagaccgtggcggggccagcagtacaggcacccta accccgtcagacctgaggctgggcggcggccggaccagttcggagttcgactgggacaac acgtcgcgagacagcagcgaagcgagcagtaggggaggggattcacgcccccgcatggtc ctgccctcgttcctgccccaggacctatcacacttcgactttgatgagtgcgaggcggcc accataatggtgtctctgggcagctcccgctcgggcacgccctcctactctcccatctcc aaccagtcgcccttctcgcccacgccgtcgccctcgccatccccgctcctcagcttccgc ccggccaccttcagccccatcacggccccgccttctctcacccctcgccgccaccgccat ctgagcggcactaagatgagcacgccgggctcggagcgccacctgtcgggcatcgtaccc accttccagaccaacctcaccttcaccgtgcccatgagccccagcaagcggaaactggat gcccttcctccgcccctgcccctccccgaccagcagctaggggagactataggcctccgg ccagccaccttcagggtgctctcccctcagagccagcccaccaccccctcctcgctctcc ttcccccggccccggagcgccaccagccgccccccgtcctccgccgcctccacccctccg cccatgctggtgtcccccacccctccctccccactgccccaggaccccagcccccgccgc atcgtgcccctgcgagactcccccgtcatcgtgaggaaccccgacatccccctggccaag tttacagagggacccttagggaggaggggaggagggggctgctcctccagagaccacagc cagcccctgcaccttgccaccggcctccaagcacccgtgcccatcaacggcgccgccacc aatggagcggtcctcatgcgaaaccccgcctccaccctggtccttgtaacctccacccag tccctgaccccagccgtcacaggacgccctgtccactccagcccagcccccagtggtggc tccgcctccatgtcctctactggctccgccctctccagctctggatcaggcggtagggag tgggagaggaagtccggagggcatcaggacgccattggagggacactgccgcagccggta gcctgccacccctcgcccactgccctgctgcccctaatcctaccagccgagtcccctcaa cctgcaccccgcaaggacatcatcatgggacggcccgggacagtatggaccaatgtggag ccccggtcagtgccagtgtttccttggcattcattggtccctttcctggagcccagccaa tcgagtgcggctgcccagcccactgatggccaacagcttgtcaatcagagcaacgagcct cgttgtggggtggccctagtgagtgacggatgggtgggcccaccagatgcaggacgaggg tctccatcccgcccaccgacctcctccaatgacaacaacccccaagctgaaaaagcagaa agaggcggagccgacagcgagacggaaagcgatgcagatgacccgttctttccaggtgta gcaaatgatactgccccgtctacaggcactatgaagaggcggtctcagtccctcagtgct cttccaaaagatggagacagaaagagggaaaaggaccacattcggcggccaatgaacgcg ttcatgatctttagcaagcgtcaccgggcgctggtgcaccagaggcaccccaaccaggac aaccgcacggtcagcaagatcctgggcgagtggtggtacgccctggggccacaagagaag cagaagtaccatgacctcgccttccaggtgaaggaggctcacttcagggcccacccagac tggaagtggtgcaacaaggacaggaggaagtctatctctgagggccgagggaccccaggg gccaaagaagcacgcgagaggagcatgtcggagagcgcagagcccgagttagtgtctcag ggcatggagctgaagggtacgtcaggcccgggctggcctgggggctctgagcatcatgcg ggggcctacagtggccagctccctcgcccccgggccttctcccagagtgcagtacacagc ctggagaggagggagcgggccagagacgtggagaagttgtgtcaagaagggaccggctcg ttccgcagccgcccccctactctctccctggcacagtgtgggggcagcgaggacgtgacc agcgacgaggagcgcatggttatctgtgaggaagagggggacgatgatgtcatggaggac tcgtgccctgaaggatccatagacctcaagtgtaaagagagagtgactgacagtgacgag gatgagccggatggacagcaagccttccagccagtggtccgttcctctctcccctcctcc accaacacctcctacgccgactctcactccgactctaccaagggggacacaagggggagc gacggagagagctctgagaggaagagaaaacgagggatggagggaggagaagagggaagt ggagaatccaaaagaggaaggggtggaggggggcacgttccttctaattccatccctgga tcggcgcccaacacctcaacccctgctctgggttatggactcacccaggtgctcggtgca gtccggatggcccccgccatggtgaccaaaacggtatgccccatcaccagcatgcccatc cccatcgccagcaagccaatggaaggctccattaccctcagtgccctgcctggggagaac aaagccacgcttctgattggaggaccgggagcaggaggcgggcctttcacagcaggggtc caagcccagtctccagtcttgcagagcaagatgttggttcccatggcaacagtgagaacc agctctactcctcagcccagctccctggtggctcctccccttcctgtgcaaaatggtgct ctaccaggaagcaagattatccagatcgcccccatgccgatgggccagacaaatgtccac tctgctggagcagtgcatcctgggagtcccttccatgtatccatggcaacagccactgtg atgactccgggcatcgcaccccctcagaccgtgttgctaacctcgcctccaacaaggatc acttatgtccagtcaggcaccggagtggtctccacggcaacagtccaggcccctccctct ccaggccccgcctacctgccgtcgtccctggcgaccctgggcttcactgccatcgccccg gccggccaagcccttgtgcaccctctcgtagcaggccaaccaccctggctagccccagcc ctttcccctggagccccggggaccggacgtcaacacctcaccgccatttacccggcccag aacgtcaccctggcgccagatgtggtttccatgacctccgtgccagccaatttggctcaa gaactgtccggccaatcatcacgctcagctgtcggcgtccagggttcaaaggacgtgacc cggtcacatgaagagggaatgccacacctgactgcagagatggagcacaagccacaggtg gagggccaggcccaaaggaagaccaagacacagataaagaaagagagcataaagaaagaa aagatgacggaggatgtcgaggcacatagcaaacccggtgctaactcaatgggtacgtcc agcagcaacacaccaacagggagtgaagaaaatggtggtcgagccagccacgtgaaagaa gagaacacagacgatgccagagattatgccaaagagaaacagacagacgtggatggagag agggagagggggataaagatggaatgtgggacacctgaaccagagaggtccagggagaca gatgattggccccatgagggccacaacaaaggggacagcggcaacgggggccacagcaaa ggggctggaccgagggaacctccccaccctcccacaggacaggacactcctccgcctgcc ccacagactgacagggacgcgcccccctcagccaagaagaccaaattccgccctccgcca ctcagaaagccctccgactccattgacaaggctctgtcggggtcctatttcgaggagcgc tttgccgagctgccagagttcagaccagaagaggtgctgccctctcccaccctccatagt ctggccacttccccccgagccatactgggcagctaccggaagaagaggaggaactccaca gacctggactcgtctgcagaggaccccagctctcccaggaggaagactgcagctcggagc cgtctctccagctgcagctcggagcccaacacacccaagagcgacgtcaagtgtgagggg gacatcttcacctttgacagagctggtgctgagtctgaagatgtcttgggggggatggac agagggccgtactcctctctccggaggactctggaccagcgcagggctctcgtcatgcag ctcttccaggaacacggcttcttcccttcagcccaggccactgcagccttccaggcgcgc tactcagacacctttccctccaaggggtgtctgcagctgaagatcagggaagtgaggcag aagatcatgcagacagccacacctggaacccctggaatctctgagctcggcgggtcaaca acagaggtcccggggtcaacagactccacctccgccgccaacggctcctcaaatactaac actcgagatggtacagggacggagcctggagaaagagggaggagtcccgaggagcccagg agtttgggtaaattgtag

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