Salmo trutta (river trout): 115175960
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Entry
115175960 CDS
T08542
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115175960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115175960
03016 Transfer RNA biogenesis [BR:
stru03016
]
115175960
03012 Translation factors [BR:
stru03012
]
115175960
04131 Membrane trafficking [BR:
stru04131
]
115175960
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115175960
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
115175960
Transfer RNA biogenesis [BR:
stru03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
115175960
Translation factors [BR:
stru03012
]
Eukaryotic type
Elongation factors
115175960
Membrane trafficking [BR:
stru04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
115175960
Exosome [BR:
stru04147
]
Exosomal proteins
Proteins found in most exosomes
115175960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
115175960
NCBI-ProteinID:
XP_029591506
Ensembl:
ENSSTUG00000033175
LinkDB
All DBs
Position
36:complement(35084366..35088410)
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMGWFKGWKVERKEGGASGVTLLEALDSILAPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
AALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGNFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIIVMVPGKPMCVESFAAYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASTGKVTKSAIKATKAK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacattaacatcgtggtcattggccatgtcgactccggcaag
tcaaccaccacaggtcatctgatctacaaatgcggaggcattgacaagagaaccattgag
aagttcgagaaggaggctgctgagatgggcaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagagggagcgtggtatcaccatcgacatttccctgtggaagttc
gagactgccaagtactacgtcaccatcattgatgcccctggacacagagactttatcaag
aacatgatcactggtacctctcaggctgattgcgctgtgctgattgttgctggtggtgtg
ggtgagtttgaggctggtatctccaagaacggccagacccgtgagcacgctctcctcgcc
tacactctgggagtgaagcagctcattgttggagtcaacaagatggactctactgaaccc
ccctacagccagaagcggtttgaggagatccagaaggaggtcagcacctacatcaagaag
attggctacaaccctgccaccgtcgcctttgtgcccatctctggatggcatggggacaac
atgctggaggctagccccaacatgggctggttcaagggatggaaagtcgagcgtaaggag
ggtggggctagcggtgtgacccttctggaggctctggactctatcctggccccctcccgc
cccactgacaagcccctccgtctgccccttcaggacgtctacaaaatcggcggtattgga
acagtaccagtgggccgtgtggagacaggcaccctgaaggccggtatgatcgtcaccttc
gcccccgctaatgtcaccactgaggtgaagtctgtggagatgcaccacgagaccctggaa
gcggctctccccggtgacaatgtcggcttcaacgtcaagaacgtatctgtcaaggatatc
cgtcgtggcaacgtggctggagacagcaagaatgaccctccaatggaggccggcaacttc
accgctcaggtcatcatcctgaaccaccctggccagatctcccagggctatgcccccgtg
ctggattgccacaccgctcacatcgcctgcaagttcagcgagctcaaggagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaaagccctgaagtctggagacgccgcc
atcattgtcatggtgccaggaaagcccatgtgtgtggagagctttgccgcctaccctccc
cttggtcgttttgccgtgcgtgacatgagacagaccgttgccgttggtgtcatcaaggcc
gtcgacaagaaggctgccagcactggcaaggtgaccaagtctgccattaaggccacaaaa
gccaaatga
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