Salmo trutta (river trout): 115175967
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Entry
115175967 CDS
T08542
Symbol
ncdn
Name
(RefSeq) neurochondrin isoform X1
KO
K27819
neurochondrin
Organism
stru
Salmo trutta (river trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neurochondrin
Tra1_ring
Motif
Other DBs
NCBI-GeneID:
115175967
NCBI-ProteinID:
XP_029591520
Ensembl:
ENSSTUG00000034918
LinkDB
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Position
36:35217071..35228570
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AA seq
828 aa
AA seq
DB search
MMALAMAEGTFIVSSESDSSGEHTGSEEGEGAPLAIDGLSAAQREVLERCLHTLTHAKND
SHTLAALVLITRLCPAGQLDSATLRRIFEAVGLSLPARLLVTAVRGSDASGLPPEELLSL
GTALLAALSTDPDMAAHPQLLTTIPLLLGLLADGPKWSPQKQAKHQARQGMEPDQPSQAE
DEQSSQSTNTTKEPVQDTAGFKAPSQDATSPTGSEEGTAENGAPTSHSTVKLDEALTTDC
YQVLITVCALPRGPDQLLARGAVPALCRALEQKQTLSHEKGLPLLGALLSGKTKEKAWSK
HPAELLSLLARVSQDFCQATGLTQLDMCALVPQFLPSPGGTPKDTDLTPTMVSLWAALRP
MLQAKLTPGQLGPVLVLSACLLDLCGWEPVGPPKFCCLLVNRACVEVRMGLEEPPDTELS
PQLQQTLTACYRIMEAAMEQACSSQGVAQQSDAQPQTAITGLSLQQSRQVLRVLEEAFSA
VIYHLQQVDPSRYGDPFIFATFRSLCAWLAEETSCLKEEVTALLPFLMGYARSHLQGESQ
DEGLSNWMSEMSVGDCSQGGAWTGKDAVRYLLPALCHLSAEDAPRKVLLTLDTPALLVTF
LTQGWGDLRGKGGAALTRDPSMETACSALLNFTVTEPEQVRKDPCFRSLESLLSEALPVL
LHKPRLLVLAANLCTLGLMIGRLKPAPKAPVEADQRRFFSAALRFLRGALDSSSGPGPVR
VSPAWEEWWEEVGELWRLGLQALGGCVKAQPWIITLVREEGWLNHTLAMLGSCSTLPDPH
TQGALEEVLCAVALQCPFCRQEISVLLKSSAKGALGSMGSLRKSLTTN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgatggcattagcaatggctgagggtacatttattgtgagctctgagagtgattccagt
ggcgaacacacaggcagtgaggaaggagagggagctccactggcgatagatggcttgtct
gctgcccagcgcgaggtcctggagcgctgtctacacacactcacccacgccaaaaacgac
agccacacactcgctgcactcgtcctgattacacgattgtgtccagcaggccagcttgac
agtgcgacgctgcggcgcatcttcgaggcggtggggctaagtcttccagctcgcctgctg
gtgactgcggtccgggggagtgacgcctccggcttgcccccagaggagcttctgtctctg
ggcacagctctgctggctgccctcagcacagacccagacatggccgcccacccacagctc
cttaccaccatccctctactgctagggctgctggccgatgggcccaaatggagcccgcag
aaacaagccaagcaccaggctagacaagggatggaaccagaccagccaagccaggctgaa
gatgaacagtcatcacagagcacgaacactaccaaagagcctgtccaggacactgcggga
ttcaaagcaccatctcaggatgcaacgagccctacaggctctgaggaaggtactgcagaa
aatggagctccaacttcccattcaacagtcaaactggatgaggccttgactacagactgt
taccaggttctgattacagtgtgtgctttaccccggggcccagatcagctcctggccagg
ggtgctgtcccagctctttgtcgggccttggagcagaaacagacactgagccatgaaaaa
ggattacctcttcttggtgccctgctctcaggcaaaactaaagagaaagcctggagtaag
cacccagccgaactcctctctctcctggccagagtctcccaagacttctgccaagccact
ggcctcacccagctcgatatgtgtgccctggtgccgcagttcctgccctcgccaggtgga
acaccaaaggacactgacctaacgccaactatggtcagtctgtgggcggccctgaggccc
atgctgcaggccaagctgaccccaggtcaattaggccctgtgttagtcctctccgcctgc
ctgttggacctgtgtggctgggagcctgtggggccacctaagttctgttgcctgctggtg
aaccgggcctgtgtggaggtgaggatgggcctggaggagccccccgatacagagctgagc
ccccagctgcagcagacactcactgcctgctaccgcatcatggaagcggccatggagcag
gcctgcagcagccagggagtcgcccagcagagcgatgcccagccacagactgccatcact
gggctcagtctgcagcagagcaggcaggttctccgggttctggaggaggccttctcggca
gtcatctatcacctgcagcaggttgatccgagtcgttacggcgaccccttcattttcgcc
acattccgttccctctgcgcctggctcgccgaagagacttcctgtctcaaggaagaagtg
actgccctcttgccctttctgatgggctacgccagaagccatctgcagggagagagtcag
gacgagggtctttccaattggatgtcggagatgtctgtaggcgactgctcacagggaggg
gcttggacaggaaaagatgctgtaaggtatctcctcccagctctgtgccacctctctgca
gaggacgccccaagaaaggtgttactcaccttggacaccccagctctcctggtgaccttc
ctaacccagggatggggtgacctgcgggggaaaggaggggcagcgttaacccgagatccc
agtatggagacagcctgctcggccctgctcaacttcactgtcacagagccggagcaagtc
agaaaggacccatgtttcagaagccttgagtcactgttgagtgaagcacttcctgttctc
ctgcacaaaccccgcctcttggtcctggctgccaatctttgtactctggggctcatgatt
ggcaggcttaaaccggctcctaaagctccggttgaagcagaccagaggcggttcttctcc
gcagccctgcggttcctccgtggtgccctggactccagctcaggcccaggcccagttagg
gtgagccctgcctgggaggagtggtgggaggaggttggggagctgtggaggcttggtctg
caggccctgggaggttgtgtgaaggcccagccctggatcatcaccctggtcagggaggag
ggttggctcaaccacaccctcgccatgttgggctcctgtagcaccttgcctgacccccac
acccagggggcactagaggaggtcctctgcgcagtggcactccagtgcccattctgtcga
caggagatcagtgtcctcctgaagagcagtgccaagggagccttgggtagcatgggcagt
ctgaggaaatcccttaccacaaactga
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