Salmo trutta (river trout): 115176158
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Entry
115176158 CDS
T08542
Name
(RefSeq) uncharacterized protein LOC115176158 isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115176158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115176158
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115176158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
Myb_DNA-bind_4
TINF2_N
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
DUF6471
MADF_DNA_bdg
GeBP-like_DBD
Sucrose_synth
C1_4
Motif
Other DBs
NCBI-GeneID:
115176158
NCBI-ProteinID:
XP_029591850
LinkDB
All DBs
Position
36:33782882..33794517
Genome browser
AA seq
1445 aa
AA seq
DB search
MSLADDVGWTWSADETKALISVWSDEQILLKMEQTYRNKHVYSEISERLKDLGVKRTWKQ
CQNKIKALKWRYRETLRNPSSSRPCPFFSELHEFLAAMPDMPESKETDEEEDTGLPLPLS
SLRLLVPPLRLVSAALWQVVQRRDTMDYGLVEEFVTTVLEMIPDLMSYREKVQLIMGLRA
QLVLELCRSDCSADPETIQPHLSRMRTCIITHREKEIDTEVEASESNFLELVQTLLDDPI
EREHFFQDVFPEEFGPKYDAALQTLMWEFLVRLEKLLPTPTFQQTVSWLRPAPSVLKECA
QSVTQPRPLKTLLQHNRCHGHLFTNAPSSGADDRILSSLSHSLSERIEMDIDEARSHSQS
LSTCASRNERDTLIEQDNAEKELGMSLDTVKKAVEMVDGRTEEWGENVYEERLQHDLAYD
VLKVEIVDGEDMSSTSSMTADEVGWTCWTPEETKSLISVWSDEQILHKMEQSYRKKHVYS
EISECLKELGIKKTTKQCHNKIKALKWRYRETLRNPSSRPCPFFSKLHKFLAAVTDMPES
KETGKISDGGVMSLDRDKGPSVAVELEPQREKMISRKVKDKTLPGEQTKEKKEDETFCIP
QSDSKMKSPPKKHCRKQMVEGMSSTTSADNDTRTWTLEGTKALISVWSNKHVLQMMEQSY
RKKHAYSEVSERLKNIGIRRTWKQCQSKIKHMKHSYRQALRNPSISGRATCPFFSELHTF
LANMPDMPDSKGTGKVSDGEVVSSDQDEGPSVELEHLHEKMASRKVKVKALPREQTEERK
GDESDSRKQHVVEDVSDLELQPVVLLTQLDDNSLMTVGAPGPVSHTAEQSPKRSKRAKIC
SLCGKSFVEAKDLTTHMRTHTEQSPHQCTQCGEGFDHQDDLHKHQQHECEEMMKQQEVNE
HQHGKNDRISGQSSNASSDPKTCHLCHKTFEFQYMLRSHLIIFHKGKILFKCPLCLKGFA
FLRDLKKHQSNKRGCPTSEAVKKRKELRSKSPSARIIPELSLNANHSKTCPVCHATFSQT
SSLKSHYLHHHAPDKSRFKCPSALKAFVSHSQRKRHQQNKRGCRLERVYKHGTKPAWSLA
PRENKNDIPPPSSTATQEPPISQAPTTTAQSSNKKTIPKACPLCHKTFKFEATMVRHIAS
HQKESLNKCPDVLKCTFCEEIFSQGMDLKSHYSRTHQFTGPFPCPSCQKTFVSLTELRLH
QRNESTPYQCSVCQRLFRTQYTLTIHERIHTGEKPFLCAECGKGFRSEKLLQSHSKSHVE
GKPHACSTCGKRFQRKELLKQHMLHHTDAAFICPDCGKKFFQLVWLRRHMLMHTGERPFL
CDLCGKGFKSTAELRIHTRTHTGERPFKCPECGKGCRQKSELQEHLRRHTGERPYPCTVC
DKRFYVSKDRKRHMLIHTGEKPFKCQACGMAFNRKALLRVHQKNKSCLYSHTSPLHYTPL
HYTSL
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgtcattggcagacgatgtcggatggacatggtccgcggatgagacaaaggcgctgatc
tcggtatggtcagacgagcagattcttctgaagatggagcaaacgtacagaaacaaacat
gtttacagcgaaatttcggagcggttaaaagaccttggtgtcaaacggacgtggaagcag
tgccaaaacaagattaaggccttgaagtggagatacagagaaacactgagaaacccaagc
agtagccgaccgtgtccgttcttttctgaactgcacgaatttctcgccgccatgcctgac
atgcctgagtccaaggaaactgacgaggaggaagatactggtcttcctcttcctctgtcg
tctctgcgtcttttggttcctccactgcggctggtgtcggcagctctatggcaagttgtt
cagcggagagacacaatggactacgggttggtggaggagtttgtcaccactgtgttggag
atgatccctgatctgatgagttacagagagaaagtacaactcatcatggggctgcgagca
cagctggttctggagttgtgtcgctctgattgttcagccgacccagagaccatccagcca
cacctgagcaggatgagaacctgcatcatcactcatagagagaaggagatagatacagag
gtggaggcatcggaatcaaacttcttggaactcgtccaaactcttctagatgacccaatt
gagagggaacacttcttccaggatgtttttccagaagaattcgggcccaagtatgacgca
gcactgcagactctgatgtgggagttcctcgtcaggctggagaagttgcttccaacgcca
acctttcaacagactgtatcctggctcagacctgctccatctgtgctgaaggagtgtgca
cagtctgtgactcaacctcggcctttgaagactctcctccagcacaacagatgccatggc
catttgttcactaatgctccttcatctggtgctgatgatcgcatcctctcttcactgtct
cactcgctctcagagaggatagaaatggacattgatgaagcacgctcgcatagccagtct
ttatccacgtgtgcatccagaaatgaaagggacactttgatagagcaagataatgcagag
aaggagctggggatgagtttggacacggttaagaaggcagtggaaatggtggatggaagg
acagaggaatggggagagaacgtctatgaggagagactgcaacatgacttggcttatgat
gttttaaaggtagagattgtagatggagaagacatgtcctcaacatcatcgatgacagca
gacgaggttggatggacctgctggacacctgaggagacaaagtcacttatctctgtatgg
tcggatgaacagattcttcataagatggagcaaagctatagaaaaaaacatgtttacagt
gaaatttcagagtgtctaaaggagcttggtatcaaaaagacaaccaagcagtgccacaat
aagataaaagccttgaagtggcgctacagagaaacactgaggaacccaagcagccgaccg
tgtccgttcttttctaaactgcacaaatttcttgccgcggtgactgatatgcctgagtcc
aaggaaactggcaagatttcagatggaggagtcatgtctttggatcgggataaagggcct
tctgtggctgtcgagttggagcctcaacgtgaaaaaatgatttccagaaaagtgaaagac
aagacactccccggagagcaaaccaaagagaaaaaggaggatgaaacattttgcatccct
caaagcgacagcaagatgaaaagcccccccaaaaaacattgtcgcaaacagatggttgaa
ggcatgtcttccacaacatcggcagacaatgacacgcggacctggaccctggaggggacg
aaagcgctgatctccgtgtggtcaaacaaacacgttcttcagatgatggagcaaagttac
cgaaaaaaacatgcgtacagtgaagtttcagagcggctaaagaacattggcatcagaagg
acgtggaagcagtgccaatcaaagattaagcacatgaagcacagctacagacaagcactg
aggaacccaagcattagtggccgagcaacctgtccgttcttttctgaactgcacacattt
ctcgccaacatgcctgatatgcctgattccaagggaactggcaaggtttcagatggcgaa
gtcgtgtcttcggatcaggatgaagggccttctgtagagctggagcatctacatgagaaa
atggcttctagaaaagtgaaagtcaaggcactccccagagagcaaacagaagagagaaaa
ggggatgaaagtgacagcagaaaacaacatgtggttgaagacgtgtctgatttagaactt
cagcccgtagtgctgctgacccaacttgatgacaacagtcttatgacagttggtgctcct
ggtcctgtttcccataccgcagagcagtctcctaaaagaagcaagcgtgccaaaatttgc
tccttatgtgggaagagttttgttgaagcgaaggatttgacaacacacatgcgaactcac
actgagcagagccctcaccagtgcacccagtgtggggaaggctttgaccatcaggacgac
ttacataaacatcagcagcatgagtgtgaggagatgatgaaacaacaggaggtcaatgaa
caccagcatggaaagaatgacaggatatcaggacagtccagtaacgcaagtagtgatccc
aaaacatgccatctatgccataagacttttgaatttcaatatatgttgagaagtcatctt
attatatttcacaaaggcaaaatactttttaagtgtcctctttgtctgaagggttttgcc
ttcctccgtgatttgaagaaacaccagagtaataaaagaggttgtcctacaagtgaagcc
gtcaaaaaaaggaaggagctaagatcaaaaagcccttctgctcgcatcattccagaactt
tccttaaatgcaaatcattccaaaacatgccctgtatgccatgcaacgttttcacaaacg
tctagtttgaaaagccactatcttcaccatcacgccccagacaagagccgctttaagtgt
cccagtgctttgaaggcttttgtatcccacagtcaaaggaagagacaccagcagaataaa
agaggttgtcggttagaaagagtttacaaacatgggactaagccagcatggtcactggct
ccaagggaaaataaaaatgacattcctccgccttccagtacagcaacccaggaaccacca
atctctcaagcccccaccactacagcacagtcctctaataaaaagacaattcctaaagca
tgtcctctatgccataagacttttaaatttgaagctacaatggtaaggcacattgcttca
caccaaaaggaaagtctcaacaagtgccctgacgtcttgaagtgcaccttttgtgaagag
atcttttcacagggcatggacctgaagagtcactacagtcgtactcatcaatttacggga
ccgttcccctgtccttcttgtcagaagacttttgtttcgttaactgagctgcgcttacat
caaagaaacgagtccactccttaccagtgctcagtgtgccagcgattattccgaacacag
tataccctgactattcacgagcgaattcacacaggggagaaaccgttcctctgcgccgag
tgtggaaagggtttccggagtgaaaaactactgcaatcacactcgaagagtcatgtcgag
ggaaaaccccacgcttgctccacttgtgggaaaaggttccagagaaaagagctattgaaa
caacacatgttgcatcacacagatgctgctttcatctgcccagactgtgggaagaagttt
tttcagttggtatggttaagaaggcatatgttaatgcacactggcgagagaccattcctc
tgtgacctctgtgggaagggtttcaaatctacggctgaattgaggatacacacccggaca
cacactggagaacggccattcaagtgtccagaatgtggcaaaggttgtaggcagaagagt
gagctgcaggagcatctgcggaggcacacgggggagcggccgtatccatgcacagtgtgc
gataaacgcttttatgtcagcaaagatagaaaacgacatatgctcatacacactggagag
aagccgttcaaatgtcaagcatgtggcatggcgttcaaccgtaaagcacttttgagggta
caccaaaaaaacaagtcgtgtttatatagccacacaagtcccctacattacactccccta
cattacacatcattgtaa
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