Salmo trutta (river trout): 115176277
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Entry
115176277 CDS
T08542
Symbol
tdp2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2 isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115176277 (tdp2)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
115176277 (tdp2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
UBA_8
Exo_endo_phos2
TAP_C
DUF6821
Motif
Other DBs
NCBI-GeneID:
115176277
NCBI-ProteinID:
XP_029592061
Ensembl:
ENSSTUG00000037734
UniProt:
A0A674CQL0
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All DBs
Position
36:complement(2275443..2282304)
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AA seq
379 aa
AA seq
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MSDISKSVSTLEETRTGLCDEFVSITGSDSAVAQCYLAENDWEMERALNSFFEANMEAVF
AVEDSPKKDISPPKVKRRKLDKPQGKMDCIDLTTEEPACSSSSAKSTKSVEPKAKIKTSV
SEEQEDGKLSLISWNVDGLDTVNLGERARGLCSYLALYTPDVVFLQELIEPYVQYLKKRA
VSYTIVEGGEEGYFTGLMLKKSRVKLLSSDIISYPTTQMMRNLLVAQVKFRDQVMCVMTS
HFESCKGQAEERMKQLREMLKRMREAPSNVTVLFGGDTNLRDTEVTKVGGLPSGVCDVWE
QLGKQEHCRYTWDTKANSNKSVPYVSRCRFDRVYLRPAKEGPGSRMTPDHMALVGLEKLD
CGRYTSDHWGIYCSFIPGS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatttccaagtccgtgtcgactttagaagaaacgaggactggtctgtgtgat
gagtttgtgtccataacaggatccgatagcgccgtggctcaatgctaccttgctgaaaac
gactgggaaatggagagagctttgaactcatttttcgaggctaacatggaagcagttttt
gcagtagaagattcaccaaagaaggacatcagcccacctaaagttaaaagacggaagttg
gacaaaccacaggggaaaatggactgcattgacctgaccacagaagagcctgcctgttcc
agcagcagtgccaagtcaaccaagtcagtggaacccaaagctaaaattaaaacctcggtc
tctgaggagcaggaggacggcaaactgtcgttgatctcttggaatgtagatgggctggac
accgtgaacctgggagagcgagctagaggcctctgttcctatctggccctctatacccct
gacgtggtgtttctgcaagaactcattgaaccgtatgttcagtacctcaagaagcgagcc
gtcagctacaccatcgttgaggggggtgaggaggggtacttcactggtttgatgctgaag
aagtccagagtcaaactcctgagtagtgacatcatcagttacccaaccactcagatgatg
aggaatctgctcgttgctcaagtgaagttcagggaccaggtgatgtgtgtgatgacgtcc
cactttgagagctgtaagggacaggcggaggagaggatgaaacagctgagggagatgctg
aagagaatgagggaggcgcccagtaacgtaactgtcctatttggaggggacaccaacctg
agagacacagaggtgaccaaggttggaggtctacccagtggggtgtgtgacgtgtgggaa
cagttggggaagcaggagcactgcaggtacacctgggacaccaaggccaacagcaacaag
agtgtaccgtatgtcagcaggtgtcgttttgaccgagtctacctccgaccggccaaggag
ggccccgggtcccggatgaccccagaccatatggctctggtgggtttagagaagctggac
tgtggtcgctacaccagtgatcactggggaatctactgcagttttatccctggctcctga
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