Salmo trutta (river trout): 115176288
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Entry
115176288 CDS
T08542
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115176288
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115176288
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_Aladin
PAC11
DSE1_N
WD40_RFWD3
TPR_19
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_SPT8
TPR_2
Beta-prop_VPS8
CFAP251_N
TPR_17
ANAPC3
ASA1
TRM82_WD
Beta-prop_SCAP
TPR_BSK1_C
TPR_6
TPR_16
CFAP70_TPR_C
RMD1-3
Barstar
Motif
Other DBs
NCBI-GeneID:
115176288
NCBI-ProteinID:
XP_029592083
LinkDB
All DBs
Position
3:complement(46733598..46749652)
Genome browser
AA seq
676 aa
AA seq
DB search
MTCCEAMSAVNITRDILHRQIRDKRALGFQRQYHVTDPFISRLGLEAELQGHTGCVNCLE
WNEQGDLLASGSDDQHCIIWDPFKHKKLTTMHTGHAANIFSVKFLPHSGDRILVTGAADT
KVHVHDVSVKETIHMFSDHTNRVKRIATAPMWPNTFWSAAEDGIIRQYDLRESSKRSEVL
IDLTEYCGQLVEAKCLAVNPQNNNYLAVGANGPFVRLYDMRMIHNHRKSASQSTSAGVHT
FCDRQKPIPDGAGQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYL
FDLTFKQKPYTYLLPKKCQLTDVQNGKTTNGVSNGIHLPASRLRFAESKVFSGSGELPPH
LERIKQQANDAFARQQWTQAIQFYSLGIHEASHNAMLYGNRAAAYMKRKWDGDHYDGLRD
CLKALSLNPGHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDKDIKA
ALFSKMDSAEDKKGNSSIRFHTFSRKESIPEDEVVLRERSYDYKHRYCGHCNTTTDIKEA
NFFGSKGQYIVSGSDDGSFFIWEKETANLVRILQGDESIVNCLQPHPSYCFLATSGIDPV
VRLWNPRPETESESGNGRVVEDMEGAAAANQRRMNADPLEVMLLNMGYRITGLSGRGPEG
SDDEDSSDGQVQCRPS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgacttgctgtgaggccatgtctgctgtgaacatcaccagagacatcctgcacaggcag
atcagggacaagagagcattgggcttccaaaggcagtatcatgtcacagaccccttcatc
agtagacttggactggaggcagagttgcagggccacactgggtgtgtgaactgcctggaa
tggaacgaacagggagatctgctggcatcgggctcagatgaccaacattgcatcatctgg
gaccccttcaaacacaagaagctcaccactatgcacacagggcatgcagcaaacatcttc
tctgtgaagtttctccctcactcaggtgaccgtatcctcgtgacgggtgcagcggacacc
aaggttcacgtgcacgacgtgtcggtcaaggagaccatccacatgttctctgaccacacc
aaccgcgtcaagcgcattgctacggcccccatgtggcctaacaccttctggagtgctgcg
gaggacggcatcatcaggcaatatgacctgagggagagcagtaagcgttcagaagtgctc
atcgacctgacggaatactgtggtcagctggtggaggccaagtgtttggctgtcaacccg
caaaataataactatctagcagtgggggccaacgggccctttgtacgcctctatgacatg
cgcatgatccacaaccacaggaagtctgcgagtcagagcacatcggcaggagtgcacaca
ttctgcgacaggcagaagcccatcccagacggagcggggcagtattatgtcgcagggcac
ctgccagtgaagctccctgactacaataaccgcctgagggtcctagtggccacctacgtc
accttcagccccgacggcaccgagctgctagttaacatgggaggagaacaggtgtatcta
tttgacttgacgttcaaacagaagccctacacctatctgcttcccaaaaagtgccaatta
acagatgttcagaatggaaagacaaccaacggtgtgtcaaatggaattcacttgccagcc
agccgtcttcgattcgcagaaagcaaagttttctctggttctggcgagctgccgcctcac
ttggagcggataaagcagcaggccaacgacgcgtttgcgcggcagcagtggacgcaggcc
atccagttctacagtctgggcatccacgaggccagccacaacgccatgctgtacgggaac
cgcgccgccgcctacatgaagcgcaagtgggacggtgaccactatgatgggctgagggat
tgtctgaaagccctgtccctcaaccctgggcacctgaaggcccacttccggctggcacgc
tgcctctttgagctgaagtacgtggccgaggctctggagtgcttggatgacttcaagggc
aagttccccgagcaagcccacagcagcgcctgcgacgccctagataaggatatcaaggcc
gccctcttctccaagatggactctgctgaggacaaaaagggcaacagctcaatccgcttc
cacacgttcagcaggaaggagtccatcccagaagacgaggtcgtcttgagagagcgcagc
tacgactacaaacaccgctactgtggtcattgtaacaccaccacagacatcaaggaggcc
aacttctttggcagtaaaggccagtacattgtgagcggctccgacgacggctcctttttc
atctgggagaaggagaccgctaacctggtgcggatcctccagggggacgagtccatagtc
aactgcctgcagcctcaccccagttactgcttcctggctaccagcggcatcgaccctgtg
gtgcggctctggaaccccaggccggagacggagagtgagagtgggaacgggcgcgtggtg
gaggacatggagggcgcggctgcagccaaccagcggcgtatgaatgccgaccccctggag
gtcatgctgctcaacatgggttaccgcatcacgggcctcagcggccgcgggccagagggc
tcggacgatgaggacagctcagacggccaggtgcagtgccggcccagctag
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