Salmo trutta (river trout): 115176297
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Entry
115176297 CDS
T08542
Name
(RefSeq) histone-binding protein RBBP4-like
KO
K10752
histone-binding protein RBBP4
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
stru03083
Polycomb repressive complex
stru04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115176297
03083 Polycomb repressive complex
115176297
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
115176297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115176297
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115176297
Histone modification proteins
HAT complexes
HATB complex
115176297
HDAC complexes
Sin3A-HDAC complex
115176297
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115176297
PRC2.2
115176297
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115176297
Heterochromatin formation proteins
Other heterochromatin formation proteins
115176297
Chromatin remodeling factors
NuRD complex
115176297
NuRF complex
115176297
NuRF complex (fruit fly)
115176297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
eIF2A
Beta-prop_IFT140_1st
Beta-prop_SPT8
MIOS_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
115176297
NCBI-ProteinID:
XP_029592094
Ensembl:
ENSSTUG00000038801
UniProt:
A0A674D0C9
LinkDB
All DBs
Position
36:5005426..5024553
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEGVFDDAVEERVINEEYKIWKKNSPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICMWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEAGGDQ
EVTA
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaggaaggtgtttttgatgatgcagtggaggagagggtgataaatgaggag
tataagatctggaagaagaacagtccattcctctatgacctggtgatgacccacgctctg
gagtggcccagcctcaccgcacagtggctgccggatgtatccaggcctgaggggaaggac
ttcagcgtgcaccgtctggttctggggacgcacacgtcagacgagcagaatcacctggtc
atcgccagcgttcagctgcccaatgacgatgcccagtttgatgcttcgcactacgacagc
gagaaaggcgagtttggaggttttggctcagtgagtggaaagatagagattgagataaag
atcaatcatgagggagaggtgaaccgggccaggtacatgccccagaacccctgcatcatt
gctaccaagacacccacctcagacgtactggtcttcgactacaccaagcatccatccaaa
cctgacccttcaggagagtgtactccagacctgcgcctgaggggacatcagaaggagggc
tacggcctctcgtggaaccctaacctttctgggtgtctccttagtgcttcagacgaccat
actatctgtatgtgggacatcagtgcagtacctaaagaagggaagattgtggatgctaaa
accatctttacaggacatactgctgtagtggaagatgtatcctggcatctcctccatgag
tcactgtttggatctgtagcggacgaccagaaactcatgatctgggatactcgttccaac
aacacgtccaagcccagccacgctgtggacgcccacacagcagaggtcaactgtctctcc
ttcaacccctacagtgaatttatcctggccaccggctctgcagacaagactgtggctctg
tgggacctgcgtaacctcaaactgaagctccactcgtttgagtcgcacaaagatgagatc
ttccaggtccagtggtcgcctcataacgagaccatcctggcgtccagtggtactgacagg
cgactcaacgtgtgggacctcagtaaaataggagaggagcagtctgcagaggatgcagag
gacggtccccctgagctactgttcatccatggaggacacacagccaagatctctgacttc
tcgtggaaccccaacgagccctgggtcatctgctctgtgtctgaggacaacatcatgcaa
gtctggcagatggctgagaacatttataacgatgaggatccagaagcaggaggagaccag
gaagtcacagcctga
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