KEGG   Salmo trutta (river trout): 115176394
Entry
115176394         CDS       T08542                                 
Name
(RefSeq) integrin alpha-10-like
  KO
K06586  integrin alpha 10
Organism
stru  Salmo trutta (river trout)
Pathway
stru04510  Focal adhesion
stru04512  ECM-receptor interaction
stru04810  Regulation of actin cytoskeleton
stru04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115176394
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115176394
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115176394
   04810 Regulation of actin cytoskeleton
    115176394
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:stru04515]
    115176394
Cell adhesion molecules [BR:stru04515]
 Integrins
  Integrin alpha subunits
   115176394
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 Integrin_A_Ig_3 VWA_2 FG-GAP_3 FG-GAP_2 ITGAX-like_Ig_3 vWA_SIBA-E
Other DBs
NCBI-GeneID: 115176394
NCBI-ProteinID: XP_029592276
Ensembl: ENSSTUG00000039883
LinkDB
Position
37:1950997..2004209
AA seq 1170 aa
MELHKYLLLLKFIVLLKGLCECFNIDVKRPRIYTGPEEALFGFSVLQHDNAGDKSMLVGA
PWDGPSNTRRGDVYKCIVGEERSSNCTKTNLGESTLQNVSRNLKNSHLGMTLSPDSPDGF
LACAPLWSQECGTSVFSTGICASVSDDLEPRETIAPTAQRCATYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEVAVHEWSLRDYQTTKEVVEAAKNISRQEGR
ETRTAYAIHMGCTEAFSTERGAREGATKVMIVVTDGESHDGEELPDALEECEKRNITRYA
IAVLGHYIRRQQDPETFISEIKYIASDPDDKYFFNVTDEAALNDIVDALGDRIFTLEGTL
GYNESSFKFEMSQIGFSTHVLDDGILFGMVGAYDWDGGVLKEGAEGRIMPTREAFESEFP
QELKNHAAYLGYTVSSVIVGDWRRLYVAGAPRFKHKGKVILFELSNNGDVNIAQALNGEQ
IGSYYGSEVCGLDVNQDGITDVLLVAAPMYLGPGNKEAGRVYIYSLSGEEVFVSNGTLKA
EDRSQDARFGYALASAPDLNHDGYTDLLVGAPLEDGHNGAIYVYHGQGIHIIHNYKQRIA
GSSLSPSLQYFGRSVSARLDLDGDGLLDLAVGAQGSAVLLSSRSIVQINMSLSFQPHSIN
VIQKTCQRGGRESACLNATACFLALSRSPGTHSNSFELSVVAMLDERKLTARALFDDSNQ
RQTQLGVRVYTGETVCHNLPFHVFDTADYIRPISFSLRFKINDTESGPVLDEGWPTTFKR
SITFFKDCGEDDVCVTDLVLQAHMDISGTRQQPYVIRSPRRRLAVEVQLQNRLENAYNTS
LTLYYSHNLHFSSLSIREDNQLKIECTSLSSNSHSCNVSYPVFRSHSKVNFMLEFEFSCT
SLLSKVQMKLTVASDSVEREATLGDNSVQLQTVVQYEPDLFITSDSNLNRYEVHPTRTIS
EAIGPEFYTHFRLQNLGCYSVSNLELRLSLPSVAAGDRVFMAVTEVFSYNVTGVNCSVDS
DVSQLKDRQRDVRPLHPEDMQQTDLLNCSRSWCVEVVCEVQQLHRGQTALIRVSRRVHDN
FFRQAKFKVVRIVSAYRLAAQESNLVTLGNGAIWRETVLEVLKGRAIPISLWILIGSIIG
GLLLLALIIFAMWKLGFFTRKQIKDEELED
NT seq 3513 nt   +upstreamnt  +downstreamnt
atggagctgcacaaatacctgctactcctcaagttcatagttctcctcaaagggttgtgt
gagtgtttcaacatcgatgttaagcggcctcgtatctacactggtccagaggaggccctg
tttggtttctctgtgctacagcatgacaatgcgggggacaaatcgatgctggttggtgct
ccttgggatggaccttccaataccaggagaggagacgtgtacaaatgcatcgtgggagag
gagaggagctccaactgcaccaaaacgaacctaggtgagagcacgttacagaatgtatct
agaaacctgaagaactctcatctaggaatgaccctcagtccagactcacctgatggattc
ctggcgtgtgcgcccctgtggtctcaggagtgtggtacgtcagtcttcagtacggggatc
tgtgcttctgtcagcgacgacctggaacccagagagaccatcgcccctacagcacagaga
tgtgcaacatacatggacatagtgatcgttctggatggctccaatagtatctatccctgg
tatgaagtccagaacttcctcagtaacatcctcagcaagttccatatcagcccagaacag
atgcaggtgggggttttgcagtacggtgaggttgcggtccatgagtggtcactgagagac
taccagacaacaaaggaggtggttgaagcagctaaaaacatcagccgacaggaggggcgg
gagacacgcacagcatacgccatccacatgggctgtacggaggcattcagcactgagcgg
ggggcgagggagggggccaccaaggtcatgatcgtggtgacggatggagagtcacatgat
ggggaggagctaccggacgctctggaggagtgtgagaagagaaacatcaccagatatgcc
atcgctgtattgggtcactacatccgcaggcagcaggacccagagacgtttatcagtgag
atcaagtacatcgccagcgaccctgacgacaaatacttcttcaacgtgactgatgaggcg
gcgctcaacgacatcgtagatgcactaggagaccgcatcttcactctagaggggacgctg
gggtacaacgagagctccttcaagtttgagatgtcccagatcggcttctccacacacgtt
ctcgatgatgggatcctgtttgggatggtgggggcgtatgactgggatggaggggtgctg
aaggagggcgctgagggccgcatcatgcccaccagagaggcctttgagtctgagttcccc
caggagctcaagaaccatgctgcctatctgggctacacagtgtcgtcagtgatagtggga
gactggaggaggctgtatgtggctggagctcccaggttcaaacacaaaggaaaggtcatt
ctgtttgaactgagcaacaatggagatgtcaacattgcacaggccctcaatggagaacag
attgggtcgtactatggcagtgaggtgtgtgggttggatgtgaaccaggatggcattact
gatgttctgctggtggcagcacccatgtacctgggccctggcaacaaggaggcaggcaga
gtctacatctactccctcagtggggaggaggtgtttgtgtctaacggtactctgaaggca
gaggataggtcccaggatgctaggtttggctacgccctggcctccgccccagacctcaac
catgacgggtacactgacctgctggtgggggcacccctagaggacggacacaatggggcc
atatacgtctaccacggccagggcatacacattatccacaactacaaacagcgtatcgca
gggtcatccctgtccccctctctgcagtattttgggcgcagtgtgagtgccagattggac
ctggatggagatggtctgttagacctggctgtgggggcccagggcagtgctgtactactc
agttctcgtagtatagtccagatcaacatgagtctgtccttccagccccactcaatcaac
gtcatccagaagacgtgtcagagaggagggagggagtctgcctgtctcaacgctacagcc
tgcttcctggctctgtcccgctcccctggaactcacagcaacagcttcgagctgtcggtg
gtggccatgttggatgagagaaagttgacagcgagggcgttgtttgacgacagcaaccag
agacagacacagctgggggtcagagtttacacaggagagactgtttgccacaacctgccc
ttccatgtgtttgacacagctgactacatccgtccaatcagcttctccctgcgctttaag
atcaacgacacagagagtggcccagtgctggacgaaggctggcccaccaccttcaagaga
tcgattacgttcttcaaagactgtggtgaggatgatgtgtgtgtcactgatctggtgctg
caggctcacatggacatctctgggacaagacagcagccctatgtgatccgtagccctcgc
agacgtctggctgtagaagtccagctgcagaacagactggagaacgcctataacaccagc
ctaacactgtactactcacacaacctccacttctctagtctcagcatacgggaggataac
cagttgaaaattgagtgtacatctctcagttccaacagtcattcctgtaatgtcagctat
cctgtgttccgctcccactccaaggtgaacttcatgttagagtttgagttcagctgtacg
tctctgctcagtaaagtccagatgaaactcacagttgccagtgacagtgtggagagagag
gctacgttgggagacaacagtgttcagctccagactgtggttcagtacgaacctgacctc
tttatcaccagtgactccaatctgaaccgttatgaggtccacccaaccagaaccatatca
gaggcaataggaccagagttctacacacacttcaggctgcagaacctgggctgttacagt
gtgagtaacctggagttgaggctgagcctgccctctgtagcagctggagacagagtcttc
atggctgttactgaggtcttctcttacaacgtgacaggggtgaactgcagtgtagacagt
gatgtgtcccagctgaaggacagacagagagatgtacgaccactacatcctgaagacatg
caacagactgacctactgaactgcagcaggtcgtggtgtgtggaggtggtgtgtgaggta
cagcagctgcatcgaggacaaaccgctctcatacgagtcagccgcagggtccacgacaac
ttcttcagacaggctaagtttaaggtggtgaggatagtgagtgcctatcgtctggctgct
caggaatctaacctggtcactctggggaatggcgccatctggagggagacggtgttggag
gttctaaaggggcgggccatccccatttctctctggattctgataggtagcatcattgga
gggcttctgctattggccctcatcatcttcgcaatgtggaagctggggttcttcactcgt
aaacagataaaggacgaggaactcgaggactaa

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