Salmo trutta (river trout): 115176535
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Entry
115176535 CDS
T08542
Name
(RefSeq) trichohyalin-like isoform X1
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115176535
Membrane trafficking [BR:
stru04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115176535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
LbR_Ice_bind
PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
115176535
NCBI-ProteinID:
XP_029592434
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All DBs
Position
37:complement(9050148..9069647)
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AA seq
2001 aa
AA seq
DB search
MGTKRPSLTPFDTFDPSNQSASYRNPQPISQICRETSPRPGTVARTDRERERIREEEWRR
EREMERLKDKTRNRRKEMEPGPRERNREKEEREWRERERGRAGERRANGRPTSNLEIRND
RDREKERKKGDTFPRMIKNSKERDRRMSAFVEEDVGKEGTRQLERQKGTEMDDWERERET
AAKIQRYRDAERDFQRYREREREREKERIRAQEDGERNGGKPMEDKTVRRRERAREAETD
FRERRRERDSKGNDLWSKRERYMDGERERSKLRQGEREVRRREGDSQNYSDREGRDGRRE
GNTEGQRDTMSEGDSDGEKWKERVRDDNRRELKHPHSKSEGDNEGNAAWDRVREKEKERQ
KWRGGEIYRERGGKRDAYRPRVREGDRDRDGKSDMERYRERDRRKVREVERERDEVKEGG
RREDGPRERRDPEKVREGTQSNVTGERGKRMDGERFRERERYSKGEDEERRRREKKDRET
DPKREGGADGASQSLSETAPRVPPRVQSSGEWSSDIERERKWRRGRESHEEKESEGDVDR
GQRECSEKERPDRVRGREEGEEETIPKRPEQRRMWLLPQRVRYNKDSSLEDEVIERERDR
HTNRWRDRSEEEDRSVEQRTGREKERKTEGEGQEDRSVEQRKSIDEERKTEREGGRERYS
ERGLNVDEDDETEAWRSYSRGEEHQTYSDGEREERWQRDSETERENVTDNAEGDREEEGG
SDRYARFESDGGSEREWEGGRDRIPSSEDGFITVSSGGEEEFEDCKEFLEVGVANHVTRQ
PIGFQGSEGEMERGGGRRHERERERTEERTEQNDDAVEGEVNDGKGKKQPTYVFCVIGQT
LPRSKPNQTAVLGDLESEQTNQNPGYGDRDSGDITHPSRDGDQGAKNERKIVKDEIHVPK
EERTDTEESSIVDVSHTTLERESGERLKVMEENPYAERERRRNSETEKLLKEWRERHKEY
TEIRERDPTDRRRTEPEIGPSSHPSGEYHHHGVPVVDQATSDQNNPGVMSPEEAVAIQIC
IRGAWSTEEEAKRHSQASQMKWAKNVLSEILGSSEEHALGNPQPESQGGQEVSQTARGTE
RVEEELEEEKDETPEGGGASTVYATVQKRTKHGRKSVEARLAEREAEPGKVEDERGTGEK
LTDMHTEAFTAMLGDGKPIDLHAALTLHNTHGDTPTDRQGEEVEDNNVCADRQTDSHIHI
QVEMVTEDEGEMEKGVEVVDEVHILDAEKEANAQKEEDLFLSVSNTLYKPTSCPSLIYNP
DSEQPIIPIEEKTEEEGEKERPVGEGEENSVVEGEENSVVEGGENSVVEGGENSVVEGGE
NSVVEGKQEKRIEDGTDDRGKVGEATEERKVDREEEKRVGGEEERMREGKEESKKTGGGG
VKSTCSFQDSGTDVRYRRRGFHKTTERRNEEEEEGRGDARDRRTRIFQASDDEEEEMSFN
WGDVDLRNVTDTIRMARRNSKFYNSQLYQEYSETAQNREILSQSCSDALSIYEELPVPLS
PVPSSLAPSFPPARRPLPRLPPVIHPHSLSLSGSTSSGTSAKFLPIPQPPQAPPARPSSP
RLSISLTQSPSLWQEIPEVRNSAEFGELTDDQRRLQEVQFEVVTSEASYCRSLDIVVDHF
VKSKQLGELLTTQDRNWLFSRLADVRAISHSFLSKLEERVESDMMHFTVCDIIARHCQRF
KKVYVPYLTNQSYQDATYQRLMDENHGFRRVVEKLERSPVCQRLPLRSFLILPFQRITRI
KLLVQNIVKRTAQGTEEEVQAIKAMKLLERLIQESNDSITQMKSIESLVSLSARVDFECR
TLPLVSQSRRLVREGPVTEMMDFSLKETERSVYLHLFNDYLLLSLNKEGGRFTVIDHAPV
SELRAENCRVKLHSLEKNLFRLHLNKKALLLSTDTQGDKLRWISAVSRPHPVIDYSAEQD
FTQMQCIRAFVAHQPDELSLEKAEVILVHQQSSDGWVEGTRLSDRHRGWTPESHLETIAS
LRVRQRNLLDALKITTATAAV
NT seq
6006 nt
NT seq
+upstream
nt +downstream
nt
atggggactaaacgccccagtctgactccctttgacacatttgatccatccaatcaaagc
gcttcctaccggaaccctcagccaatcagccagatctgccgcgaaacaagtcccagacct
ggaactgtggcccggacagacagagagagggagaggatccgagaggaggaatggaggaga
gaaagagaaatggagagattgaaggacaaaacaagaaatagaagaaaagagatggaaccc
ggaccaagagagaggaacagagagaaggaggaaagggaatggagagagcgagaaaggggg
agagcgggagagagacgtgccaatggaagacctacttcaaatctggagattaggaacgac
agagacagagaaaaggagagaaagaaaggagacacgtttcctagaatgataaaaaatagt
aaagagagagacagaagaatgagtgcatttgtggaggaagatgtggggaaagaaggaacg
agacaattggagagacagaagggaacagagatggatgactgggagagagaacgagagaca
gcagcaaagatacagcggtatcgagatgcagagagggacttccaaaggtacagagagagg
gagagggagagggagaaggagagaatcagggcacaggaggacggagagagaaatggaggg
aagcccatggaggataagacagtgagacggagggagagagcgagggaagcggagacagat
ttcagagagaggagaagagagagggattcaaagggcaatgacctatggagcaaaagagag
aggtatatggatggagagagagagaggtcaaaactccggcagggagaaagggaggttaga
agaagagagggagattcacagaactattcggatagagagggcagggatggaaggagggaa
ggaaatacagagggacagagggacaccatgagtgagggagacagtgatggagagaagtgg
aaagagagagtgagggatgacaacagaagagaactgaaacatcctcatagtaaaagtgag
ggggacaatgaggggaacgcagcatgggatagagtgagggagaaagagaaggagagacag
aaatggagagggggggagatatacagagagaggggtggaaagagagatgcttatagaccg
agagtgagggaaggggacagggacagggatggaaagagcgacatggagagatacagagag
agggacaggagaaaagtgagggaagtggagagagagagggatgaggtgaaagaagggggc
agacgagaggatggaccaagggaaaggagggacccggagaaagtgagggagggaacacag
tccaatgtaactggagagagagggaagcggatggatggagaaagattcagagagagggag
agatattccaagggggaggatgaagagaggaggcgcagggagaagaaggacagagagaca
gatcccaaaagggagggaggagcagacggagctagtcaatcgctgagtgagacagcccca
agggtgccaccacgagtccagagcagcggagaatggagcagtgacatagagagggaaaga
aaatggagaagaggaagagaaagtcatgaagagaaggagtcagagggagatgtggacagg
gggcagagagagtgtagtgaaaaagagagaccagatagagtgagggggagagaagaagga
gaggaggagacgataccaaagcgccctgagcaacggaggatgtggttattaccacagagg
gtcagatataacaaagactcctctttagaggatgaggttatagagcgagaaagagacagg
cacactaacagatggagagatagaagtgaagaagaggacagatccgtggaacaaaggaca
ggcagagaaaaagagaggaagacagagggagaaggacaagaggataggtcggtggaacaa
agaaagtccatagacgaagagagaaaaactgagagggagggtgggagggagaggtattcg
gagagagggttaaatgtagatgaagatgatgagacagaagcctggaggagttatagcaga
ggagaggaacaccagacttacagcgatggagagagagaggaacgctggcagagggacagt
gagacagagagagagaatgtgacagataacgcagagggtgacagagaggaagaaggagga
agtgatagatatgcacggttcgagagcgatggaggaagtgagagagagtgggaaggaggg
agagatagaatcccttcctctgaggacggctttatcactgtgtccagcggtggagaagag
gagtttgaggactgcaaggaattcttggaagttggggttgctaatcatgttacaaggcaa
cctattggctttcaggggagcgagggagagatggagagaggtggagggagaagacatgaa
agagagagagaaagaacagaagagcggacagagcaaaatgatgatgcagtggagggagag
gtgaatgacggaaaggggaagaagcaacccacctatgtgttctgtgtgattggacaaaca
ctgcccaggtcaaaacctaatcagacagcagtcttgggtgacttggaatcagagcagacc
aatcaaaatcctggatatggtgatagggacagtggtgacataacacacccttccagagat
ggagaccaaggggcaaagaatgagagaaaaatagtgaaggatgagatccatgtgccaaag
gaggagagaacagacacagaagagagctccatagtggacgtcagtcacaccaccctagaa
cgagagagcggagaacgactgaaggtcatggaggagaacccatacgctgagagagagcga
aggagaaactctgagaccgaaaaactcctcaaagagtggagagaaagacataaagagtac
acagaaataagagagagggacccaacagacaggaggaggacagaaccagagataggtcca
tcttcacatcccagtggagagtaccaccaccatggggttcctgtagttgaccaagccacc
tctgaccagaataaccctggagtgatgagcccagaggaagctgtggccatccaaatctgt
ataaggggagcctggagcacagaagaggaggccaagcgccactcccaggcctcacaaatg
aagtgggccaagaacgtattgagcgagatccttggcagctcggaggaacacgccctcggc
aacccccagccagagtcacagggaggtcaagaggtcagccagactgcgagagggaccgag
agggtagaagaggagctagaggaagaaaaggatgagacgccagaggggggaggagcctca
accgtctatgccacggttcagaagaggacgaagcatgggaggaagtcggtggaggcgagg
ctggctgaacgggaggcagagccagggaaggtggaggatgagagaggtacaggggagaaa
ctaacagacatgcatactgaggctttcacagctatgcttggtgatggcaaacccatagac
ctgcatgctgccctgaccctacacaatactcatggtgacacacctacagacagacaggga
gaggaggtggaggataacaatgtgtgtgcggacagacaaacagacagtcatatacatatc
caggtagagatggtgacagaggatgagggtgagatggagaaaggggtcgaagttgtggac
gaggttcatatactggatgcagagaaagaagcgaatgcccagaaagaggaagatctgttt
ctctctgtgagcaacaccctgtacaaaccaaccagctgccccagccttatatacaaccct
gattcagaacaacctatcatccccatagaggaaaagacggaggaagaaggggagaaagag
aggcctgtgggagagggggaagagaatagtgtggtagagggggaagagaatagtgtggta
gaggggggagagaatagtgtggtagaggggggagagaatagtgtagtagaggggggagag
aatagtgtggtagaggggaagcaggaaaagaggatagaagatgggaccgacgacaggggg
aaagtgggagaggcgactgaggagaggaaagtggacagggaggaggagaagagggtagga
ggggaagaggagaggatgagggagggcaaggaagagagtaaaaaaacgggaggagggggg
gtgaagagcacttgtagtttccaagattctggcaccgatgttcggtataggaggcggggg
ttccacaagacaacagaaagaagaaacgaggaagaagaagaaggaagaggagatgcgagg
gatcgcagaacaagaatattccaggcgtcagatgatgaggaggaggagatgagcttcaac
tggggagacgtggacctgaggaatgtcacggataccatcagaatggctaggaggaactcc
aaattttacaattcccagctctaccaggagtacagtgagacggctcagaacagggagatc
ctcagtcagtcttgctctgacgccctctccatctacgaggagctccctgtccccctgtcc
cccgtaccctcctccctggccccctcgttccctcctgcccgcagacccttaccccgtctc
cccccagtcatccacccccactctctgtccctctctggctctacctccagtggcaccagt
gccaagttcctacccataccacagccgccccaggcccccccagccaggccttcctctccc
cgcctctccatctccctcacccagtcccccagcctgtggcaggagatccctgaggtcagg
aacagtgctgagtttggggagctgactgacgaccagagacgcctgcaggaggtgcagttt
gaggttgtaacttcggaagcgtcgtactgtcgtagtctggacattgtggtggatcacttt
gtcaagtctaagcagcttggggagctgttgactactcaggacaggaactggctgttctcc
aggctggctgatgttcgagccatcagccacagttttctgtcgaagctggaagagagggtg
gaatctgatatgatgcacttcaccgtgtgtgacatcattgctcgccactgtcaacgcttc
aagaaggtctacgtgccctacctcaccaaccaatcatatcaggatgccacttaccagaga
ctcatggatgagaaccatgggttcaggcgggtagtggagaaattggaacgcagtccagtg
tgtcagcgtcttcctcttcgctccttcctcatcctccccttccagaggatcacacgaatc
aaactccttgtgcagaacattgtgaagagaacagcccaaggcacagaggaggaggtccag
gccatcaaagctatgaagctactggagagattgatccaggagagcaatgacagtattact
cagatgaagagcattgagtcgctggtctctctcagtgccagagtggactttgaatgcagg
actctccccctggtcagtcagtctcgtaggctggtgagagagggaccggtgactgagatg
atggatttctctctgaaggaaacagagaggagtgtctaccttcacctcttcaatgactac
ctgctgctgtcgctgaacaaagaagggggcaggttcacggtgatagaccatgctccagtg
tcagaactgcgagctgagaactgtcgtgtcaaactgcactctctagagaagaaccttttc
cgcctccaccttaacaagaaagccctgctacttagcacagacacacaaggtgataaactg
cgatggatctcagctgtctccaggccccatcctgttattgactactctgcagaacaagac
ttcacacagatgcagtgcatccgagccttcgttgcccaccaaccagacgagctgtccctg
gagaaggctgaggtgattctcgtccaccagcagagcagcgacggttgggtggaggggacc
aggctgtcagacagacacagaggatggactcctgagtcccatttggaaaccatagccagc
ctcagggtccggcagcgcaacctgctggacgctctaaaaattaccacagccacggctgca
gtatga
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