Salmo trutta (river trout): 115176570
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Entry
115176570 CDS
T08542
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1-like
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04621
NOD-like receptor signaling pathway
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115176570
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115176570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
stru04054
]
115176570
Pattern recognition receptors [BR:
stru04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115176570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_4
NOD2_WH
LRR_6
AAA_16
AAA_22
AAA_18
NPHP3_N
ATPase
AAA_30
AAA_29
Viral_DNA_bi
RNA_helicase
NTPase_1
Sigma54_CBD
Motif
Other DBs
NCBI-GeneID:
115176570
NCBI-ProteinID:
XP_029592492
Ensembl:
ENSSTUG00000025850
LinkDB
All DBs
Position
37:complement(15751605..15758640)
Genome browser
AA seq
954 aa
AA seq
DB search
MYIMGSSAEEARSGLTGHVSTVQMLTLHRELLVSHVKSTQCIMDNLLESGFLCIEDAEII
QRAATKTDQVRKILELVQSKGEQACEYFLYILYKVYDAYIDLQPWLKEINYQPSDFIRHI
PVKNTDPISRYCEKLRHELGRDTRFIASYTKREETLLEELYTDTLMELLNDRNESLGQLE
GLEQLLGEQGVFNPQAETVLITGDAGVGKSILLQKLQRLWSNRELEQTDTMFFFKFRCRM
FSTFKETDEISLRDLLFKYNCYPDQDADNEVFSYILRFPKKVIFTFDGYDEIHADLDLEN
MPEVVSPEEKTHPLLVLINLLCGKLLNGSRKVLTARTGTEVQSRVIRKRVALRGFSLAHL
QIYTNLHFKDQEHRDLVSVQLDASPHLCGLCSIPLFCWIVFKSFKHLRSVYDDFELPEAC
VTLTNIFLLLSEVFFSRGASPPPGLLKRNTRCPADTFRAGLRPLTAFSKLALLGMERGGF
VFDQEEVASCGLTEEDLQVGFLRPVSCYDACGNPSTFEFFHLTLQSFLAAFSLVLDEQAS
VGNILKFFTECSRRDNTSCLSCVLPCIGGSSKPRGKDPFKTNEHLQYTNLFLCGLLSKTN
AGLLEHMVPPALLKRKRAVLKSYLSTSVRSHLRGLPLHSTEQEGSKVHVLPNFLWMLRCI
FETGSKEVAQLTAKGITADYIKLGYCNVFSGDCSALNFVLQHRRKRLGVDMDNNNISDYG
VKQLRPSFSKMTVVRLCVNQISDSSVEVLAEELIKHRVVEVLGLYNNLITDIGAKLIAQI
IEECPKLRVVKVGSNKFTSVGGRYLASAIQKSSSIFDVGMWGNNIGDEGARAFAEALRNH
PSLTNLSLSANGITSEGGRSLAEALKGNTMLRIFWLVQNELSDDVAPDMAELIRSNTGLS
HLWLINNQMTVDGIRQLSEALSHNTSLKEICLKGNCLSEEEEKLFEAEGRLRFH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtatattatgggctccagtgccgaggaagcccgttctggactaacgggccatgtgtcc
actgtccaaatgctcaccttgcatcgtgagctactggtttcccatgtgaagagcacgcag
tgtattatggataacctcttagaaagtggttttctgtgtatcgaggatgcagaaatcatc
cagcgcgcagccaccaagacagaccaggtgcgtaaaatcctggaattggtccaaagcaaa
ggggagcaggcatgtgaatacttcctatatattctctacaaagtttatgatgcatacata
gacctccaaccatggcttaaagagatcaactaccagccatcagacttcatacggcacata
ccagtaaagaacacggaccctattagtaggtactgtgagaagctgaggcacgagctgggc
cgagacacacgcttcattgcatcctacaccaagcgagaggaaaccctgctggaggagctc
tatactgacaccctgatggagctcctgaatgaccgcaatgagagcctgggccaactggag
ggtctggagcagctcctaggagagcagggtgtctttaacccacaggcagagacggtgctc
atcacgggggacgctggggtgggcaagtctatcctcctccagaagctccagagactgtgg
tccaatagggagctggaacagacagacaccatgttcttcttcaagttccgttgtaggatg
ttcagcacgttcaaggagacagacgagatctcactcagggacctgcttttcaaatacaac
tgctaccccgaccaagatgcggacaatgaggtgttcagctacatcctccgcttccccaaa
aaggttatctttacttttgacggctatgatgagatccacgctgatctggacctggagaac
atgcctgaggtggtttctccagaggagaagactcaccctcttctggtgctcattaacctg
ctctgtgggaagctgctcaatggttctcggaaagtccttactgctcggacaggcactgag
gtccagagcagggtgatccggaagagggtggcactgcgtgggttctctctggcccacctt
caaatctacaccaacctgcacttcaaggaccaagagcaccgggacttggtctcagtccag
ctggatgccagcccccacctctgtggcctctgctccatccccctcttctgctggatcgtc
ttcaagagctttaaacacctgcgctcagtctacgacgactttgagctgccagaggcttgc
gtgaccctcactaacatattccttctgctttctgaagtcttcttcagccggggggcctct
cccccaccgggcctcctgaagagaaacaccaggtgccccgctgataccttcagggcaggg
ctgaggccactgacagccttctccaagctggctctgctgggcatggagagaggaggcttt
gtgttcgaccaggaggaggtggcctcctgtggcctgactgaggaggaccttcaggtgggt
ttcctacgaccagtcagctgctacgatgcctgtggaaacccttccacctttgagttcttt
cacctcaccctgcagtccttcttggctgcattctccctggttctggacgaacaggccagc
gtaggaaacatcctcaagttcttcaccgagtgcagcaggagggacaacacatcttgttta
tcgtgtgtcttaccctgcatcggtggctcctccaaaccaaggggaaaggatccattcaag
accaacgagcatctccagtacaccaacctcttcctgtgtggattgctgtctaagaccaac
gccggcctgctggagcacatggttcctccagcgctactgaagaggaagcgggcggtcctc
aagtcctacctgtccaccagcgttcggtcccacctccgtggcctgccactccacagcaca
gagcaggagggcagcaaggtgcatgtccttcccaacttcctgtggatgctgcgttgcatc
ttcgagacaggaagtaaagaggtggcccagctgactgcgaagggcatcacagctgactac
atcaagctgggctactgtaatgtgttctctggcgactgcagtgccctcaactttgtgctg
cagcaccggcggaagaggctaggggtggacatggacaacaacaacatcagtgactatggg
gtcaagcagctcaggccttcattcagtaagatgaccgtggtgagattgtgtgtcaatcag
atctcagacagcagcgttgaagtactggctgaggagcttatcaaacacagagtggtggag
gttctgggactttacaataatctcatcacggacatcggtgccaagctaatcgctcaaatc
attgaggaatgtcctaagttaagagtcgtcaaggttggcagcaacaagttcaccagtgtg
ggtggcaggtatctggccagtgccattcagaagagctcatctatctttgatgtgggaatg
tgggggaacaacattggggatgaaggagcaagagcatttgcagaggccctgaggaatcac
ccaagtcttaccaacctcagcctctcagccaatggcatcacttcagaaggtgggaggagc
ttggccgaagcactgaaaggcaacacaatgctcagaatcttctggttggtgcaaaacgag
ttgtcagatgatgtagcaccagacatggcagaactgatcagatccaacacgggtctatct
cacctctggttaatcaataatcagatgacagtggatggaatcagacagctgtcagaggct
ctctcccacaacacatcactcaaagagatctgtttgaaaggaaactgtctttctgaagag
gaagagaagctgtttgaggctgagggaaggctacgcttccactga
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integrated database retrieval system
