Salmo trutta (river trout): 115176586
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Entry
115176586 CDS
T08542
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115176586
Membrane trafficking [BR:
stru04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115176586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
ARM_UBP24_USP9X-Y
SPA
Motif
Other DBs
NCBI-GeneID:
115176586
NCBI-ProteinID:
XP_029592518
Ensembl:
ENSSTUG00000046539
LinkDB
All DBs
Position
37:complement(19520184..19559853)
Genome browser
AA seq
1501 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSAPLDEEGQQRGCRVVEPVTDLAVIARGLGEEVPEGFT
CIEKTQGGHPAELSAGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWYVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKQGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKQSDVEKPEEVRL
IDLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDRPQDQLRVPTKGS
APSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRA
LQTAYEVLKHMETRKMVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYA
YYNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPIKQRQKSGSVGTRTDTMDSNQR
SRPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLRNVGANG
CSNPVSRKPPVGPRDTSTPSPFPPDGVLVRRDQVCLSTFYKDCAETAVSEPDCSCQPGDR
DGRPPGPRDTVSRKAVDENYNNVSPPSRGSLAGKLQQLLTPTRHRLSGRRAASVGARRSG
GENGPVRRVSEQRPSRKAQVAESLLKAKERLYTATSESSLSVGSDVDLPDTTNLAFPLRK
SWDTNQEGAGLEVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLN
AEICDLGPVSSAHHSLERTNWNMEEEVESAAKSPGDQEVILGHNGVSEDSSSETSSYSES
SSATMGSSVGGSPQVTVAYLSPLVLRKELESLLENEGEAVLAQGQLLDSHSIIFWNMVWY
FHRLGLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDHWPPLYILWRMHSG
VPMRNHSWRRHNHPFTLAFLEEVLRWVGMNEVHKGITLLLETTAKQPGTPKIQRSLYREM
LFLTLAAMGRDHVAAFDKKYKAAYQRLSGSLGREELRRKRAQPPSPKAVDCRRSFLLPLE
C
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgtccccagctagtggactactttgtggtggcagggctggctcca
gggggctcagccccactggacgaagagggccagcagagagggtgccgggtggtggagccg
gtcacagacctggcggtgatcgcccggggcttgggggaagaggtgcccgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgagctgagcgccggactcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcatgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggtatgtgatcgagaccaccccc
tacagccgctcagccagcctgagctccggggggcccgccacccaccgcaccttcctgacc
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
ctgctgcccagcaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaagagagctgtagccaaagcc
aacgccctagtctatgaagcaggtctgatcagtcggtatccggaagcggacgtggagtcg
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggcccctcaacaccaagtaccagctccctgtcttctctaccttcgtcctcaccagtgcc
tgtggcgacaaggtttacggtgctgccatccagttctacgaggcgttcccacgggagtgc
ctctcggagcggcagagcgtccgtctgggcctggtgagcgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagcgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcaccttcgtctaccgatactccatctccggaccccacgtg
ctgccccttgagaagcacatctccagcttcatgcacaacgtcccgttcccctcccctcag
cggcctcgcatcctagtgcagctctccccctatgacaaccttctactctgtcagcctgtc
tcctcccccttactgctcagtggtgccagctttgtgaagctgctgcagaacctgggccct
gagaacgcctgtgtcctgctactggccgtgctgacggagcacaaactgctgctccactcc
ctccgccccgacgttctcacctccgtcagcgaggccctggtgtctatgacgttccctttg
cgttggcactgcccgtacatccccttgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcatcgtgggtgtccactccagctactttgacctctatgacccccctact
gacgttgtgtgtgttgacctggacaccaataccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcgctaccaaggaagcaaggcaagatgttggtgaataccctcaccaac
ttgatgaagactctggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacctgatctacgggcgtcagaagcagctggagttggagatccag
gaggccttcctgcgcttcatgagctgcttgctgaggggctaccgcgcctacctgctgccc
atcacccaggccccctcagacaggaccaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtcccgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctccttcgtcagtgatcgccatgcctgtctcgag
ttcttcgacgagtgtgtccagaagcagtcggatgtggagaagcctgaggaggtgcgtctg
atagacctggacgaggcccacagtggggagcacacggtcttcatcatgcccccagaggaa
ccccaggaaccagacggttcagagtgccccactcactacagctatgagacattccctgtg
ctctgcatggatctttttgaccggcctcaggaccagctacgtgtccctaccaaggggagt
gctcccagcagccctgccccgcgacggactaaacaggagattaagctggcacagaagcgg
gcacagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctat
gggctgtggttcatctacttgcccacctttgtgcgggcagagagtgccaaggtgcgtgcc
ttgcaaacggcatacgaggtgctcaagcacatggagaccaggaagatggtactaccagat
gaggtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtgctcgct
gttagggtacttctggagatgaagaaagctgggatcacacccaacaccattacctatgca
tactacaacaaggcagtgctggagagcaagtggccctccaccaatcagggtggccgtctg
cgctgggccaagttgcgtaacgttctgatggccgtggcgcagttcagacagccaatcaaa
cagcggcagaagagtggttcagtaggcacgcggacagatacaatggacagtaaccaacgg
tcccgcccacaatctaacctgattcgtcagtccagctggagcggcctgagtgaaagctcc
agccacgaatcactgacggggtctatggtgaagagcaacagcctgaacagcatgagaggc
tcaacagacaagtctaagctctcaatgaaggcggtgctccggaacgtaggtgccaatggc
tgcagcaatcctgtctcccgtaagccccccgtggggccacgagacacctccaccccttct
ccctttccacctgatggtgtcctggtgcgccgcgaccaggtgtgcctgtccaccttctac
aaagactgtgccgagacggccgtctctgagcccgactgcagctgccagcctggggacaga
gacggcaggccacctgggccgagagacactgtgagccgcaaggccgtggacgagaactac
aataatgtgtcaccaccgagtcggggaagcctggcagggaaactgcagcagctgctcaca
cctactcgccatcgactctcggggcggcgggccgccagtgtaggcgcccggcgctcgggg
ggtgaaaacgggccggtgcgcagggtgtcggaacagagaccgtcccgaaaagcccaggtg
gctgagagcctgctgaaggctaaggagaggctctacactgctacctctgagagttctctg
tcagtggggagtgatgtcgacctccctgacaccaccaatttggcctttcctctccgcaag
tcctgggacaccaaccaagagggagctggactagaggtgttgatgtcgagctgctccctg
tgtcggagctgtaactccctggtctatgacgaggagataatggctgggtggacgtctgac
gactccaacctcaactctagctgtcccttctgctcgaccaccttcgtcccccttctcaac
gctgagatctgtgacctaggacccgtcagcagcgctcaccacagcctggagcgtaccaac
tggaacatggaggaggaggtggagagcgcagccaagtcccctggtgaccaagaggtcatc
ctgggtcacaacggtgtgagtgaggactccagctctgagaccagcagttattctgagagc
agcagcgctaccatgggttcatcggtgggcgggtcgccccaggtgacggtggcctacctg
agcccattggtgctgcgcaaggagcttgagagcctgctggagaatgagggtgaggcggtg
ctggcacagggccagctcctggacagccactccatcatcttctggaacatggtttggtac
ttccatcgcctgggcctgcccagcaatctgctgcagctggttcgctcctcaccgctggcc
aaccaactagcacagacttcagagaactcagcagtgagggtgaggctgctgtgggacaca
ctgacccctgacacagaccactggccccccctctacatcctgtggaggatgcatagtggc
gtacccatgcggaaccacagctggcggaggcacaaccaccccttcaccctggccttcctg
gaggaagtgctgcgctgggtcggcatgaacgaggtacacaagggaatcactctcctcctg
gaaaccactgccaagcaaccaggcacgcccaagatacaaaggagtctgtacagagagatg
ctcttcctcacgctggctgccatgggtagagatcacgttgctgcgtttgataagaaatac
aaggctgcgtaccaacggctgagtggctccttgggtcgcgaggagctccgcaggaagcga
gcccagccacctagccccaaggctgtggactgcagacggagcttcctgctgcccctcgag
tgctga
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integrated database retrieval system
