Salmo trutta (river trout): 115176611
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Entry
115176611 CDS
T08542
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115176611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115176611
03021 Transcription machinery [BR:
stru03021
]
115176611
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115176611
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115176611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
115176611
NCBI-ProteinID:
XP_029592575
LinkDB
All DBs
Position
37:9806206..9844802
Genome browser
AA seq
743 aa
AA seq
DB search
MFVPLPVPFMFQRTAPDLNAWRLKSPLALRSDSEIRMSKPVEVENTVADSPMESTDSERN
GPDSNHQLQQMKISPFHLSPTLSSNKNKMEECGEMSPGPPPHHSHAPSQTPLPHTQLMLT
GSQLAGLTALLPAQQQLLLQQAQAQLLAAAVQQSVQQSNAAHAAHAAHAAHAAAQANQQA
QAAAAANQHAQQQQAGQTGQQGQSQPQGQSTQEQTGQPVPVPPTHPQLTLSQPIQLTAQD
IQQLLQLQQLVLVPGHHLQSPQFLLQQHQGQQGLLSTPNLIQLPQQNQGSLLSTPTRLGL
QAQRDKAMEGSGVMTSVSSVTSHPEEPSDLEELEVFARTFKQRRIKLGFTQGDVGMAMGK
LYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSTDSTMPSPSSLSSSSMGF
EGLPGRRRKKRTSIETNVRVALERAFITQNQKPTSEEILCIADQLSMEKEVIRVWFCNRR
QKEKRINPNSATPPLPSQPPQAPPTHKPPCYSPHMMSSQLSSQLSQAVTSLSTTLTTMSS
FSPLIPSGPTHSSLSSASSPVTPPPRSTASPAPPSHSTLSLNTGLWRMGKKNGDVSNYIT
DFAANLRNTVMGVNTGNQALNQALLSNNPLATIQALAASGGQLPLSSLEGGSKVLLGGAG
GQGGGLQSSFFLNHPAFLHMGQNPGAGLISTAVAKASQPSPFPSTSSISPTPCSPSPCSS
PASSCDFDELAHSPSSLGGAKIE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcatgtttcagagaactgcacctgacctcaacgcc
tggcgtctcaagtccccgttggctctacgttccgactccgaaatcaggatgtcaaagcca
gttgaggttgagaacacagtggctgactctccaatggagagcacagactcagagaggaat
ggtcctgactcaaatcatcagcttcagcagatgaaaatcagtccctttcacctttctcca
accctcagcagcaacaagaataagatggaagagtgtggtgagatgtccccgggccctcct
ccccaccacagccacgccccctcacagacgcccctcccacacacacagctcatgctgact
ggctcccaactggcagggttgacggctctcttgccggctcagcagcagttgttactgcag
caggctcaggctcagcttctagctgcagctgtgcagcagtctgttcagcagtccaacgca
gctcacgcagctcacgcagctcatgcagcccacgcagccgcccaagccaatcagcaagct
caggcagccgcagcagccaatcaacatgcccagcagcagcaggcgggacagacagggcag
cagggccaatcacagccccagggacagagcacacaggaacagacaggtcaacctgtccct
gtcccgcccactcatccccagctcaccctctctcagccaattcagctcaccgcccaggac
atccagcagttgttgcagctgcagcagttggttctggtaccaggacaccacctgcagtct
cctcagttcctcctccaacagcaccaagggcagcaaggactgctatcaacaccaaatctg
attcagctacctcagcaaaaccaagggagcctcctgtccactcccaccaggctggggctc
caagcacagagagacaaggctatggagggcagtggggtcatgacctctgtgtcctctgtg
acctctcaccccgaggagcccagtgacctggaggaactggaggtgttcgcccgcaccttc
aaacagagacgcatcaaactgggctttacacagggtgacgtgggaatggccatggggaag
ctatatgggaatgatttcagccagaccaccatctctcgcttcgaggccctcaacctgagc
tttaagaacatgtgtaaactcaaaccactactggagaagtggctcaatgatgcagagacc
atgtccacagacagtactatgcccagccccagctctctgtcctcttcctcgatgggcttc
gagggcctgccgggccgacgcaggaagaagagaaccagcatcgagactaacgtccgcgtg
gccctggagagagccttcatcacgcagaaccagaagcctacctcagaggagatcctgtgt
atcgcggaccagctcagcatggagaaggaggtgatccgcgtgtggttctgcaaccgccgc
cagaaagagaagcgtatcaaccccaacagtgccacccctcccttgcccagccagcccccc
caagccccaccgacgcacaaacccccctgctacagcccacacatgatgtccagtcagctg
tccagtcagctgtcccaggcagtgaccagcctcagcaccacattgaccaccatgtcatcg
ttctcccctctgatccccagtggtcccacccactcatctctcagctccgcctcctctcca
gtgactcctcctcctcgcagcacagccagcccagcccctcccagccacagcacactgagt
ctcaacacaggcttatggcgtatgggtaaaaagaatggtgacgtgtctaactacatcacc
gattttgctgcaaacttgaggaacactgtgatgggagtaaacacagggaaccaggctctg
aaccaagctctcctcagcaacaaccctctggctactatacaagccctagcagccagtggt
ggccagctgcccctttccagtcttgaggggggcagtaaggtgctgctgggtggtgcaggg
gggcaaggagggggtctccagtcctccttcttcctcaaccacccagctttcctccacatg
ggccaaaatcctggtgctggattgatcagcactgccgtagccaaagcatcccagccctcc
cctttcccctccaccagtagcataagtcccaccccctgctccccctccccttgctccagc
cccgcctcttcctgcgacttcgatgaattggcacacagcccatcctcattgggaggggct
aagattgagtga
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