KEGG   Salmo trutta (river trout): 115176727
Entry
115176727         CDS       T08542                                 
Name
(RefSeq) endoribonuclease ZC3H12A-like
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:stru03019]
    115176727
Messenger RNA biogenesis [BR:stru03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     115176727
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 zf-CCCH_4
Other DBs
NCBI-GeneID: 115176727
NCBI-ProteinID: XP_029592817
Ensembl: ENSSTUG00000008510
LinkDB
Position
3:complement(47498668..47520780)
AA seq 662 aa
MDQAFPSLQTPATELQLRVDFFRKLGYSPLEVRAALLKLGLSTDTNSVLGELVRSGASTG
TSNSTIPESGEDATGPKSNTGSSMASFRTHGSQGDRPVSLLEDRRDTDSGLKPIVIDGSN
VAMSHGNKEVFSCRGIELAVIYFLERGHSTVIVFVPSWRKEQPRPDVPITDQHILMELEK
KKIVVFTPSRRVGGKRVVCYDDRFIVKLAYESGGVIVSNDTYRDLQGERPEWKRCIEERL
LMYSFVNDKFMPPDDPLGRHGPSLENFLRKKPLLPEHKRQLCPYGKKCTYGVKCKFYHPE
RTHQSHCSLADELRENARLSSVKEDRNHMMSHLRGPQSDTSPFPSYSLENDLEHRLTLEH
RGSLREGPNCQLTENMLLNWDGPHSSRNQQARSPIGVGQGQMDWANMPSMLSPPATTDLP
YASISHERLDSGFGTYESQYSDVSQGHSKAFSPRQQPQQQGFPSGSRHPGMHPERLAQDS
FQPCRCCFHLAPFTGPQQQHHSNPHLESQSQPRYDTYSPPLFPPNMHHYSLPCNFQQGGV
GAHNFHPHQHPQKYWSDPFHGGVPQARASCSLTPSPHFHHPPTPHGAPHSCFSYRNQQEL
NSWAQSPPPFAFDTDREELRKKLQAIFNPHQVDTVMGMFPHLMDAQKLAAEILNFKSEGG
AF
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggaccaggcctttcccagtctccagaccccagccactgagcttcaactcagggtggac
ttcttcagaaagttgggctactcccccttggaggttcgggccgccctgctgaagctaggc
ctgagtacagacaccaactctgtactgggggagctggtccgcagcggagccagcactggt
acttctaactccaccattcctgagagtggtgaagatgctactggccccaaaagcaacaca
ggctccagcatggcctcctttaggacccatggctcccaaggagacagaccagtctcatta
ctggaagacaggagggacacagacagtggactgaaacctatcgtcattgacggcagcaat
gtggccatgagtcatggtaacaaggaagtgttctcctgtaggggaattgagttggcagtg
atctatttcctggaaagaggtcactcaaccgtcattgtgtttgtgccctcctggcgcaag
gagcagcccaggcctgatgtccccatcacagaccaacacattctaatggagctagagaag
aagaagatagttgtcttcactccctcgagacgtgtcggtggtaaacgggtggtctgctac
gacgaccgttttattgtgaagctggcctacgagtcgggcggcgtgatcgtgtctaacgac
acctatagggacctccagggagagcgtccggagtggaagcgctgtatcgaggagaggctg
cttatgtactctttcgtcaatgacaaattcatgcccccagatgacccgcttggtcgtcat
ggtcccagtctggagaacttcctgaggaagaagcctctactaccagaacacaaacgccaa
ctctgtccttatggtaaaaagtgcacgtacggcgtaaagtgtaagttctaccaccctgag
cgcactcaccaatcccactgctcattggctgatgagctcagggagaacgcaaggctctcc
tcagtaaaagaggaccggaatcacatgatgtcacacctgaggggcccccagtccgatacg
agcccctttccctcctattctctggagaatgacctggagcacaggctgacgttggagcac
cgcggttccctgagggagggtcccaattgccagttaactgagaacatgttgctgaactgg
gatgggccacactccagtaggaaccagcaggcccgcagccccataggagtaggccaagga
caaatggactgggccaatatgcccagtatgctctccccccccgctactactgacctcccc
tatgccagcatctcccatgagcgcctggactctggttttggcacctatgagagccagtac
tcagatgtgtcccaaggccacagcaaggccttcagtcccaggcagcagccgcaacagcag
ggcttcccctctggttccagacatccaggcatgcatccagagaggctggcccaggacagc
ttccagccctgcaggtgttgtttccatttggctcccttcacaggtccccagcagcagcac
cacagcaacccacacctcgagtcccaatcccagccaaggtatgacacctactcgcctcct
ctgttcccacccaacatgcaccactacagcctcccctgcaacttccagcaaggtggggtg
ggggcacataatttccacccccatcagcacccccagaagtactggtcagaccccttccat
ggcggggtcccccaggctagggcgtcgtgtagcctcaccccgagcccccacttccatcac
ccccctaccccacacggggccccccactcatgcttctcttacaggaatcagcaggaactt
aactcctgggcccagtcacctccaccttttgcctttgacacagacagagaggagctccgt
aagaaactgcaggccatcttcaacccccaccaagtggatacggtcatggggatgttccct
cacctgatggacgcccagaagctggctgcagagatcctcaatttcaaatctgagggaggg
gccttctga

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