Salmo trutta (river trout): 115176728
Help
Entry
115176728 CDS
T08542
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecule (CAM) interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115176728
04514 Cell adhesion molecule (CAM) interaction
115176728
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115176728
09142 Cell motility
04820 Cytoskeleton in muscle cells
115176728
04810 Regulation of actin cytoskeleton
115176728
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115176728
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115176728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
115176728
NCBI-ProteinID:
XP_029592816
Ensembl:
ENSSTUG00000043600
LinkDB
All DBs
Position
37:18934969..19006234
Genome browser
AA seq
1057 aa
AA seq
DB search
MCAHSMCAFGGMLCRVVSVLWLVLSVVSGFNLHAERPAVYGGPEGSYFGYSVDFYRPTPE
SSTLSVLVGAPKANTSQPGIIEGGAVYYCPYPPNPDPTKQRYSCTQIPFDNANNRMIKVN
GTREPLEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKVNGEKDPVGTCYVAVQNFSAYA
EYSPCRTNDPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVMTAGVAEILNGYSL
KAVLRRVPGEKHTHAAADTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVAVIN
STNLTFIMNFTGEQMASYFGYSVAVTDLNGDGYDDVLVGAPLYMERERESKPKEVGRVYL
YLQHSPLTFSEPLLLTGTHTFGRFGTAIAPLGDLNQDGYNDVAVGCPFGGEDRSGLVLIY
NGQRDLTAHGLTLSQELYGAWASSSGLSGYGFTLRGDRDLDNNHYPDLIVGAFGKGEVSV
YRARPVVSVEAEMILTPRILNPDDRSCLLTESDTMVTCLRVDICAKVSGVGIPDSVVLNA
ELQLDWLKGVRGGVKRVHFLDSHQPQHTGVLTLGHSRPHSCLNYTVYLRGEDEFRDKLTP
ISLALNYSLAPPPSNLDLPPVLNRYSSTFLQEKAYILLDCGEDNECIPDLQLSASMDRTE
LVVGDDNLVLLTINAVNKGEGAYETELHTLLPPEADYIGVERRIESLSRLNCEYRMVNDS
RLVVCDLGNPMVAGTEVSVGLRFAVQRLDDAGPHIDFDLQIHSSNKDNSKSNPVSLSLSI
SARAQLDLRGVCHPSQVVLPFPHWEPKEKPVKEDDVGPQVTHIYELHNSGPSSIREAELQ
VGWPSRFRDEHLLYALEVLTEGPISCRSNTSLNLLGLQTSSVQDTPELLGFLRNRSSPHR
YRRATSAAQPYSSKTLNCSNIICLRVLCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDPY
LLNSTVSFRVTALPYRLQPSSLPQHTTSMGTLVLWGTPDVAFAVPLWVIILAILLGLLVL
AMLTLAMWKCGFFDRARLPAEDVSDREQLTSDQLADA
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcccatagcatgtgcgcgttcggtgggatgttgtgtcgcgtggtgtcggtgctg
tggctggtcctttcggtggtctcggggttcaacctgcatgcggagcgcccggcggtgtat
ggaggaccagaggggagctactttggttactccgtggacttctaccgaccgacccccgaa
agcagcacgttgagtgtgttggtgggagcgcccaaggccaacacgtcccagccaggcatc
atagagggaggagcagtctactactgtccctatcccccaaaccctgaccccaccaagcag
cgctacagctgtacacagatacccttcgacaacgccaataacaggatgattaaggttaat
ggcaccagggagcctctggagttcaagtctcaccagtggtttggagcctcagttagaact
cacaaaggcaaagtggtggcctgtgctcctctctaccactggcgtacagtgaaggtgaac
ggtgagaaggacccggtaggaacctgctatgttgccgtgcagaacttcagcgcctacgca
gaatactcaccctgtaggaccaatgatccagacccggagggacagggtttctgccaggcc
gggttcagtgtggacttcaccaaggaggggacactggtggtgggcggacctggaagcttc
tactggcaaggtcaggtgatgactgcaggcgtagcagagatattgaatggttactctctg
aaagccgtgctcaggagagtccctggagagaaacacacacacgctgcagccgatacccac
gacgacagctacctaggttactctgtggcagtgggggaattcacaggagactcagagcaa
gagctaatagctggggttccgagaggggcacagaactttggatatgtagctgtgattaac
tccactaatctgacattcatcatgaacttcacaggagagcagatggcttcctactttggc
tattctgtggctgttactgacctcaatggagacgggtatgatgatgtactggtaggagcc
cctctctatatggagagagagagggagagtaagcccaaggaggtgggccgtgtctacctg
tacctccagcactccccgctcaccttctccgagcccctcctcctgacgggaacacacacc
ttcggacgctttggcactgccatcgccccgctaggagacctcaaccaggacggatacaac
gacgtggcagtgggttgtccgtttggtggggaggaccggagtggcctggtgttgatctac
aatggccagagagacctgacggcccacggcctaaccctcagccaggagctctatggagcc
tgggcctccagtagtggcctctccggctacggcttcaccctgaggggggacagagacctg
gacaacaaccattaccctgatctgatagtgggagcatttggtaaaggggaggtgtcggtg
tacagggctcgccctgtagtgtcagtggaggctgagatgatcctgactcctagaatcctg
aaccctgacgaccgatcctgcctcctgacagaatctgataccatggtaacctgtctcagg
gtagatatttgtgcgaaggtgagcggtgtggggatcccagactctgtagtcctgaatgca
gagctgcaactggattggctgaaaggtgtgaggggcggcgtaaagagagttcatttcctg
gattcccatcagccccagcacacaggggtcctaactcttggccacagccgtccacactcc
tgcctgaactacactgtctacctacgaggggaggatgagtttagggataaattgactccc
atctcattggctctgaactacagtttagcccctcctccttccaacctggacctcccccct
gtcctcaaccgctacagcagtaccttcctgcaggaaaaggcgtatattctgctggactgt
ggggaagacaacgagtgtattccagacctccagctgtctgcaagcatggaccgtacagag
ctggtggtcggggatgacaacctggtcctgttgaccataaacgcggttaacaaaggagag
ggggcatatgagacggagctacacacactcctaccccctgaagctgattacataggagtg
gaacgcaggatagagtctctatccaggttgaactgtgagtacaggatggtgaatgactcc
agactggtggtgtgtgacctggggaaccctatggttgctggaacagaagtatctgtaggt
ttaaggtttgctgtccaaaggctggatgatgccggtcctcacattgactttgacctacag
atccacagttcaaacaaagacaactccaagagcaacccagtcagtctgtctctctccatc
tctgccagagctcagctagacctgaggggggtgtgtcatccctctcaggtggttcttccg
tttcctcactgggagcccaaagagaagccggtcaaagaggatgacgtaggaccccaggtc
acacacatctacgagctccataactcaggtcccagtagtatccgggaggcggagctccag
gtgggctggccctctcgtttccgtgacgaacacctgctctacgctctggaggttctaacg
gaaggaccaatcagctgccggagcaacaccagcctcaacctcctgggcctacagacgtcc
tctgtccaggacactccagaattgttgggctttctgagaaaccgtagctctcctcaccgc
tacagacgagccaccagtgctgcccagccctacagcagcaagaccctgaactgcagtaac
atcatttgtctaagagttctgtgtgtggtcgggcggttggaccgtggtcagagcgctgta
gtcaagatccgttcccgactctgggctcacaccttcctccagagacgtaacgacccatac
ctcctcaactccaccgtgtccttcagagtgacggccctgccctaccgcctccagccctcc
tccttaccccaacacaccacttcaatgggtacactggtgctgtgggggactcctgatgtg
gcgtttgctgttcctctgtgggtcatcatcctggccatcctactgggactgctggttctg
gccatgctaacactggccatgtggaagtgtgggttctttgaccgggcacggctgccagcg
gaagatgtgtcagaccgtgagcagttgacctctgaccaattagcagacgcctaa
DBGET
integrated database retrieval system