Salmo trutta (river trout): 115176795
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Entry
115176795 CDS
T08542
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115176795
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115176795
Membrane trafficking [BR:
stru04131
]
Protein recycling
Others
Others
115176795
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115176795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
RA
SNX17-27-31_F1_FERM
RA_2
USP7_C2
SNX17_FERM_C
SNX17-31_F2_FERM
VirE3
DarA_N
RA_3
Motif
Other DBs
NCBI-GeneID:
115176795
NCBI-ProteinID:
XP_029592946
LinkDB
All DBs
Position
37:1203284..1220966
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AA seq
437 aa
AA seq
DB search
MLAVLSVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPTYKHAELNQERFVVYNVYMA
GRQLCSKRYREFAILNQNLKREFANYTFPKIPGKWPFTLSEQQLDARRRGLEEYMEKVCS
VRVIGESDVMQEFLSDESDENYNGVSDVELRIAMPDKTTVTVRVRKNCTTDQVYQAVVMK
VGMDSITASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTLRKWLFTTEEE
ILLNDNQLAVSYCFHQAVDDVKRGFIKVEEKSYQLQKLAEQKKMAMYLSMLRGCDGYNEI
IFPHCSCDSRRKGHVITAISIHHFKLHACTEEGTLENQVIVFEWVEMQRWDTDEEGMAFC
FEYARGDKKPRWVKIFTPYFNYLHECVERVFCELKWRKEVEEEDVDKDNKNCSKDEYLPA
VETQKGWRHLGGEIITS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgtgctgtctgtacctccccaggaggctgactgtctggaccccggagacgac
ggctcagcccagtcctgctacgactacagcgacaaacaggccgtccccatctccgtcccc
acatacaaacacgctgaactcaaccaggagaggtttgtggtgtataatgtgtacatggca
ggcagacagctgtgttctaaaagatacagggagtttgctatcctcaaccagaacctgaag
agagagtttgccaactacaccttccccaaaatacctggcaaatggcccttcaccctgtct
gaacaacaactagacgctagacgcaggggactggaggaatacatggagaaagtgtgttca
gtaagggtgattggggagagtgatgtcatgcaggagtttctgtctgatgagtctgatgag
aactataacggtgtatcagatgtggagttgaggatagccatgcctgataaaaccaccgtc
acagtccgagtccgcaagaactgtactactgaccaggtctaccaggctgtggtcatgaaa
gtaggaatggacagcataacggccagctactttgctctgtttgaggtcatcaaccactcc
tttgttcgtaaactggctcctaatgagttcccccacaagctgtatgttcagaactacacg
tctgctgtccctgggacctgcctcaccctgcgcaagtggctcttcaccaccgaggaggag
atcctgcttaatgacaaccaactggccgtcagctactgcttccaccaggcggtggatgat
gtgaaaaggggatttatcaaggtggaggagaagtcctaccagctacagaaattagcagaa
cagaagaagatggccatgtatctcagtatgttacggggctgtgacggctacaatgagatc
atcttcccacactgctcctgtgactcccgacgcaaaggccacgtcatcacagccatcagc
atacaccactttaaacttcatgcctgcacagaggagggaacgctggagaaccaggtgatc
gtgtttgagtgggtggagatgcagcgatgggacactgatgaggagggcatggccttctgc
ttcgagtacgcgaggggagacaagaaacctcgctgggtcaagatcttcactccctacttc
aactacctgcatgagtgcgttgagagagtcttctgtgaactcaagtggaggaaagaggtg
gaagaggaggatgtggataaggacaataagaactgcagtaaagatgaatatcttccagct
gttgagacacagaagggatggaggcacctaggaggagagatcatcacctcctaa
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