Salmo trutta (river trout): 115176868
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Entry
115176868 CDS
T08542
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115176868
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115176868
Membrane trafficking [BR:
stru04131
]
Protein recycling
Others
Others
115176868
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
115176868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
SNX17_FERM_C
SNX17-31_F2_FERM
PDZ_2
VirE3
RA_3
Motif
Other DBs
NCBI-GeneID:
115176868
NCBI-ProteinID:
XP_029593078
Ensembl:
ENSSTUG00000043327
LinkDB
All DBs
Position
37:complement(2455213..2482357)
Genome browser
AA seq
570 aa
AA seq
DB search
MAHVEGEGINSVAPLLVQPFSRNGSGVSPTQGTGSCQTVTTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNSVNVEGATHK
QVVDLIRVGERELMLAVLSVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPTYKHAEL
NQERFVVYNVYMAGRQLCSKRYREFAILNQNLKREFANYTFPKIPGKWPFTLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDVMQEFLSDESDENCNSVSDVELRIAMPDKTTVTVRVRKN
CTTDQVYQAVVMKVGMDSITASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTC
LTLRKWLFTTEEEILLNDNQLAVSYCFHQAVDDVKRGFIKVEEKSYQLQKLAEQKKMAMY
LSMLRVCDGYNEIIFPHCSCDSRRKGHVITAISIHHFKLHACTEEGTLENQVIVFEWVEM
QRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYLHECVERVFCELKWRKEVEEEDVDK
DNKNCSKDEYLPAVETQKGWRHLGGEIITS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgtcgagggagagggaattaattcggtggcacctctgttagttcagccattc
tctcgcaacggctccggtgtcagcccaacgcagggcaccggcagttgccaaacggtgact
accgttacttcaggcccgcgactggtgcggatagtcaagtctgactccggatatggcttc
aatgtccggggacaggttagcgaaggaggacaactacggagcatcaacggggaattgtat
gccccgctacagcatgtcagtgctgttttaccgggaggtgcagcggacagagccggtatc
tcgaaaggggaccggattctggaagttaatagtgtgaacgtggagggggcgacccataag
caggtggtggatctgatccgtgtgggggagagggagctgatgctggccgtgctgtctgta
cctccccaggaggctgactgtctggaccccggagacgacggctcagcccagtcctgctac
gactacagcgacaaacaggccgtccccatctccgtccccacatacaaacacgctgaactc
aaccaggagaggtttgtggtgtataatgtgtacatggcaggcagacagctgtgttctaaa
agatacagggagtttgctatcctcaaccagaacctgaagagagagtttgccaactacacc
ttccccaaaatacctggcaaatggcccttcaccctgtctgaacaacaactagacgctaga
cgcaggggactggaggaatacctggagaaagtgtgttcagtaagggtgattggggagagt
gatgtcatgcaggagtttctgtctgatgagtctgatgagaactgtaacagcgtatcagat
gtggagttgaggatagccatgcctgataaaaccaccgtcacagtccgagtccgcaagaac
tgtactactgaccaggtctaccaggctgtggtcatgaaagtaggaatggacagcataacg
gccagctactttgctctgtttgaggtcatcaaccactcctttgttcgtaaactggctcct
aatgagttcccccacaagctgtatgttcagaactacacgtctgctgtccctgggacctgc
ctcaccctgcgcaagtggctcttcaccaccgaggaggagatcctgcttaatgacaaccaa
ctggccgtcagctactgcttccaccaggcggtggatgatgtgaaaaggggatttatcaag
gtggaggagaagtcctaccagctacagaaattagcagaacagaagaagatggccatgtat
ctcagtatgttacgggtctgtgacggctacaatgagatcatcttcccacactgctcctgt
gactcccgacgcaaaggccacgtcatcacagccatcagcatacaccactttaaactgcat
gcctgcacagaggagggaacgctggagaaccaggtgattgtgtttgagtgggtggagatg
cagcgatgggacactgatgaggagggcatggccttctgcttcgagtacgccaggggagag
aagaaacctcgctgggtcaagatcttcactccctacttcaactacctgcatgagtgcgtt
gagagagtcttctgtgaactcaagtggaggaaagaggtggaagaggaggatgtggataaa
gacaataagaactgcagtaaagatgaatatcttccagctgttgagacacagaagggatgg
aggcacctaggaggagagatcatcacctcctaa
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