Salmo trutta (river trout): 115176890
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Entry
115176890 CDS
T08542
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
stru
Salmo trutta (river trout)
Pathway
stru03013
Nucleocytoplasmic transport
stru03015
mRNA surveillance pathway
stru03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115176890
09122 Translation
03013 Nucleocytoplasmic transport
115176890
03015 mRNA surveillance pathway
115176890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115176890
03041 Spliceosome [BR:
stru03041
]
115176890
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
115176890
Spliceosome [BR:
stru03041
]
Complex C
Other components
EJC/TREX
115176890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
115176890
NCBI-ProteinID:
XP_029593110
Ensembl:
ENSSTUG00000038984
LinkDB
All DBs
Position
37:complement(23304343..23309495)
Genome browser
AA seq
175 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKSKRRGGGRRRSRSPDRRRR
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggatcttcacgaagcgggaggagaggattttgctatggatgaggat
ggtgatgacagcatccacaagttaaaagagaaggcaaagaggagaaagggacgaggtttt
ggttcagaggagggagcgaggtccagagtgagagaggactatgatacagtggagcaggat
ggagacgagccaggtcctcagagatcggtggagggttggatcctttttgtgactggtgta
catgaagaggccactgaggaggacatccacgacaagtttgcggagtttggagagatcaag
aacctacatctgaacctggaccgaagaacgggttacctcaagggttatgcgctggtggag
tatgagacgtacaaagaagcccaggcagccatggaagggttgaatggccaggacatgatg
ggccagcctatcagtgtggactggggctttgtcagaggaccacccaagagcaagaggagg
ggtggtggacgtagacgcagcaggagtccagacaggagacgacgttga
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integrated database retrieval system
