Salmo trutta (river trout): 115177218
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Entry
115177218 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115177218
04121 Ubiquitin system [BR:
stru04121
]
115177218
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115177218
Membrane trafficking [BR:
stru04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115177218
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115177218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-Nse
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
HypA
Motif
Other DBs
NCBI-GeneID:
115177218
NCBI-ProteinID:
XP_029593664
Ensembl:
ENSSTUG00000038988
LinkDB
All DBs
Position
37:complement(1616839..1626378)
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AA seq
320 aa
AA seq
DB search
MAEAAAIPPHRFFCHCCKGEVSPKLPEYICPRCESGFIEEVTEDSSLLEGGANGTDDTAT
QFAEQLWHLLFVERPFTVDGDSPDSEPRVSGGRVGLGLRGLGGLAGLGGGPIGGSVPAGL
GGPLGGPLGGGEHWGPGRPPRLHSQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVP
GSPPLSWTGMLHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSIPTVNVSQD
QADCSMECPVCKEDFAVGEPVRQLPCNHFFHSDCIVPWLEMHDTCPVCRKGLNGEDSNTQ
NPPESPSLNTDPRTQERWSF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctgcggcgattcccccgcatcggttcttctgtcattgttgtaagggagaa
gtaagccccaagctcccggagtacatctgtcccaggtgtgagtctggctttatagaggag
gtaacagaagattccagtctgctagagggtggcgctaacgggacagatgacacagccaca
cagtttgcagagcagctgtggcacctgttgtttgtagagaggcctttcacagtggatggt
gacagtccagactcagagccccgggtctctggtggaagggttgggttaggtctgaggggg
ctgggagggctagcaggcctgggaggaggtcctatcggagggtcagtccctgctgggcta
ggaggacccctggggggtcctctgggagggggggaacactgggggcccggtcgcccccct
cgactgcacagtcagcggaggtaccgctccagagggagcagcagacctgaccgctcgcct
gccgtagaggggatagtacaacagtttctggctggtctatttgccaactctggagttcct
ggctcacctcccctctcttggacggggatgctacactctaacccaggggactatgcttgg
ggacaggggggactggacgcagtcatcacacagttgttaggtcagtttgagaacacgggc
cctcctcctgcagagaaagagaagatctcctccatccctacagtcaatgtgtctcaggat
caagcagactgcagtatggagtgtccggtgtgcaaggaggactttgcagtgggagagccc
gtcagacagctgccctgcaaccacttcttccactcagactgtatagtaccctggctggaa
atgcatgatacgtgtcctgtgtgtaggaaggggttgaatggagaagacagcaacacccag
aaccccccagaatccccctctctaaacacggacccccgcacacaggagagatggtccttc
tga
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