Salmo trutta (river trout): 115177238
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Entry
115177238 CDS
T08542
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru04080
Neuroactive ligand-receptor interaction
stru04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115177238
04082 Neuroactive ligand signaling
115177238
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115177238
Ion channels [BR:
stru04040
]
Ligand-gated channels
Glutamate (ionotropic)
115177238
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
115177238
NCBI-ProteinID:
XP_029593700
Ensembl:
ENSSTUG00000044620
LinkDB
All DBs
Position
37:complement(28258121..28383511)
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AA seq
985 aa
AA seq
DB search
MRNTWLSARSSILEYWTSAILCLFWIQYSCGMPHVIRIGGIFEQTEGPVPLVSPEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYGILDLVQFLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDGEDTRPLLKEMKRGREFRIIFDCSHEMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSQ
ERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MNFIKESHWEGLTGRLSFNRTSGLRTDFDLDIISLKEEGLEKVGKWSASGGLNITEVPKR
KGLNITDSLANRSLVITTILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELASILGFTYE
IRLVPDGKYGSQDDKGQWNGMIKELMEHRADLAVAPLTITYLREKVVDFSKPFMSMGISI
LYRKPNTTNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMESPVDSADDIAKQTKIEYGVVKDGATMSFFKKSKVSTFEKMWAFMSSKQSTSLVKS
IEDGIQRVLKSDYALLMESTTIDYITQRNCNLTQVGGVIDSKGYGIGTPMGSPYRDKVTI
AILSILEDGRLHMLKEKWWSGSSCLDEERREKAGPMGIQNLGGIFIVLASGLVLSVFVAI
AEFIYKLRKTAKREQVFLQCHGGRDQTVVHLRDACETQATPPGPGHGQDGCSDQHAHVQR
PTTPGKGQHELQHWDDPRVPVTVCASQRKSLLSNVEGVIGPDTWDNGIEGITRFTINHSD
IGTLTKHGTLSKHGTIKMAASATQV
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacacttggttgtctgcccggagttcgattttggaatactggacatcggccatt
ctatgtctcttttggattcagtactcttgtgggatgcctcatgtcattcgaatagggggg
attttcgaacaaacagagggaccggtgccgctcgtcagcccagaggagcttgcctttaaa
tttgcagtgaacaacatcaacagaaacaggactttattgcccaacacgacgttaacgtac
gacatacagaggattaatatctacgacagttttgaagcgtcaagaaaagcctgtgaccaa
ctgtctttaggtgtagtggcaatatttgggccgtcacatagctcgtcctcaaatgccgtc
cagtccatctgcaatgcgttggaagtgccacacatccaggtgcgatggaaacatcaccct
atggacaacagggacacattttatgccaacctgtacccggattactcttctctcagctac
ggcatcttggatttggtgcagttcctgaagtggaaaacagcgacagttgtatacgatgac
agtacaggtcttattagactacaggaactgataatggccccctccaggtataacatcagg
ctaaaaattcgccagctccctcttgatggtgaggacaccaggcctctcctcaaggagatg
aagagaggacgggagtttcgcattattttcgactgcagccacgaaatggctgcacagatc
cttaaacaggcccagacaatgggaatgatgacagagtactaccactacatcttcaccact
ctggacctcatggctatcgacctagagccctaccgtttctgcggcgtcaacatgaccggc
ttccgcatcctcaacgtggacaaccctcaggtggcgtccatcgttgagaagtggtcccaa
gagaggcagatacctcccaagcccgactcgggtctcctggaggggatcatgacgacagat
gctgctctgacgtacgacgcggtccacatcgtgtccgtctcctaccagcacgcaccacag
atgacggtcaactcgctgcagtgccaccgccacaagccatggcggttcggtggacgcttt
atgaacttcatcaaagagtctcactgggaaggcctgactgggaggctgtcgttcaacagg
accagtggcctccgcacagactttgacctggacatcatcagcctgaaggaagagggcctg
gagaaggtggggaagtggagtgcgtccggaggtctcaacatcaccgaggtccccaagcgg
aaagggttgaacatcacagactcgctggccaaccgttccctggtcatcaccaccatcctg
gaggaaccatatgtcatgcttaagaagtctgacaaggcgctggtgggcaatgaccgtttc
gagggattctgtatcgacctgctcaaggagctggccagcatcctgggcttcacctacgag
atccgcctggtgcctgatgggaagtacggatcgcaggacgacaagggccagtggaacggc
atgatcaaggagctgatggaacacagagccgacttggctgtggcccctcttaccattacc
tacctgcgtgagaaggtcgtggacttctccaagcccttcatgagcatgggcatcagcatc
ctgtaccgcaagcccaacaccaccaacaacggcttcttctccttcctcaaccccatgacc
cctgacatctgggtctacatcctgctggcctacctaggcgtcagctgtgttctcttcgtc
atcgccagattcagtccgtacgaatggtacgacgcccatccctgcaatcccggatccgat
gtggtggagaacaacttcaccctccttaacagcttctggttcggtgtgggctccctcatg
cagcaaggctctgagctgatgcccaaagccctgtccaccaggatcatcggaggcatctgg
tggttcttcaccctcatcatcatctcctcctacacggccaacctggccgccttcctcacc
gtggagcgcatggagtcgcccgtggactctgccgacgacatcgccaagcagaccaagatt
gagtatggtgtggtcaaagacggtgccaccatgtctttcttcaagaaatcaaaggtttct
acttttgagaagatgtgggcctttatgagtagtaaacagagtacgtcgctggtcaagtcc
attgaggacggcatccagagggttctgaagtctgactatgccttgctcatggagtccacc
acaatcgattacattacccagcggaactgcaacctcacccaggttggaggcgtcattgat
agcaaaggctatggaataggcactcccatgggctctccataccgggacaaagtgaccatc
gccatcctgagcatcctggaagatggccgtctgcacatgctcaaggagaagtggtggagc
ggcagcagctgtctggacgaagagcgccgtgagaaagccggccccatgggcattcagaac
ctgggagggatctttatagtgctggcgtctggcctggttctctccgtctttgtggctata
gccgaattcatatacaagctaaggaagacggcgaaacgtgagcaggtctttctgcagtgc
catggtggacgagatcagacagtcgttcacctgcgggacgcgtgtgaaacacaagcaaca
ccaccaggtcccggtcatggtcaagacggatgcagtgatcaacatgcacacgttcaacga
ccgacgactcccgggaaaggacaacatgagctgcaacactgggatgacccccgtgttccc
gtgacagtttgcgcctcccagagaaagagcctcctgagcaatgtggagggcgtgattggt
cccgacacctgggacaatggaatcgaggggatcaccagattcaccatcaaccacagcgac
atagggacactaacgaaacatggaacactatctaaacatggtactatcaaaatggcagca
tcggcgacacaggtatga
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