KEGG   Salmo trutta (river trout): 115177443
Entry
115177443         CDS       T08542                                 
Symbol
taf12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
stru  Salmo trutta (river trout)
Pathway
stru03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115177443 (taf12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stru03021]
    115177443 (taf12)
   03036 Chromosome and associated proteins [BR:stru03036]
    115177443 (taf12)
Transcription machinery [BR:stru03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115177443 (taf12)
   Coactivators
    SAGA/TFTC/STAGA complex
     115177443 (taf12)
Chromosome and associated proteins [BR:stru03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     115177443 (taf12)
    STAGA complex
     115177443 (taf12)
    TFTC complex
     115177443 (taf12)
    SAGA complex
     115177443 (taf12)
    SLIK complex
     115177443 (taf12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10 Pheromone
Other DBs
NCBI-GeneID: 115177443
NCBI-ProteinID: XP_029594073
Ensembl: ENSSTUG00000047381
LinkDB
Position
37:complement(33830168..33835910)
AA seq 162 aa
MTQYQPQSNRSNFFTVKAEASSTPPLATSMANSSAAAPGKVMGTPGPAGRISPEGSQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIDSVVTAACQLARHRKSNTLEVKDVQLH
LERQWNMWIPGYGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgacccagtaccaaccacagtccaaccgttccaacttcttcaccgtgaaagccgaggcc
tcctcaacaccacctctcgccaccagcatggccaatagcagcgctgccgctccagggaag
gtgatgggcacacctggccctgccggcagaattagcccagaaggaagtcaggtgttgagt
aaaaagaagctgcaggacctagtaagagagattgaccccaatgagcagcttgatgaggat
gtggaggagatgctgctgcagattgcagatgacttcattgacagtgtggtgacggctgcc
tgtcagctggcccgccatcgcaagtccaacaccttagaagtgaaggacgtccagctacac
ctggagcgccaatggaacatgtggattcctggctatggttcagatgagattcggccgtat
aagaaggcttgtacaacagaggcccacaaacagagaatggcattgatccgcaaaacaacc
aaaaagtag

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