KEGG   Salmo trutta (river trout): 115177489
Entry
115177489         CDS       T08542                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
stru  Salmo trutta (river trout)
Pathway
stru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115177489
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:stru03041]
    115177489
Spliceosome [BR:stru03041]
 Complex A
  U2 snRNP components
   U2 related factors
    115177489
 Complex B
    115177489
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 AAA_8
Other DBs
NCBI-GeneID: 115177489
NCBI-ProteinID: XP_029594163
Ensembl: ENSSTUG00000016153
LinkDB
Position
37:complement(8484343..8495586)
AA seq 501 aa
MSDFDEFERQLSENKQAQLVEHGACNARIVRSIPGNTPEKDKENRHHRRSPSRSRSRERK
RRSRDKDRRSRDRRGDSKERRPRRSSPSQQQPQEIAVSRSPHRETKKKNKVKKYWDVPPP
GFEHISVMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIP
FGITEESMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGI
IFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKE
LLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDVNLNDQITMENQAIAGLNGMQLGDKKLL
VQRASVGSKNATLTSINQTPVTLQVPGLMNSSMTQMAGLPTEVLCLMNMVAVEELVDEEE
YEEIVEDVRDECSKYGQVKSIEIPRPVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKF
ANRVVVTKYCDPDAYHRRDFW
NT seq 1506 nt   +upstreamnt  +downstreamnt
atgtcggatttcgacgaattcgagagacagctgtctgaaaacaaacaagctcagttggta
gagcatggcgcttgcaacgccaggatagtgcgctcgattcccgggaacaccccggagaag
gacaaggagaaccgccaccaccgtcgctccccctctcgcagccgcagcagagagaggaag
aggaggagcagagacaaggacagacgcagcagggatcgccgtggagacagcaaggagcgc
agaccgagacgcagctcaccatcccaacaacaaccccaagagattgctgtaagtcgttcc
ccacaccgtgaaacgaagaagaagaacaaagtgaagaagtactgggacgtccctcctcct
ggctttgaacacatcagtgtgatgcagtacaaagccatgcaggctgcgggtcagatccca
gccacggccctgctgcccaccatgaccccagatggcctggctgtgacccccactcctgtc
cctgtggtgggaagccagatgaccagacaggcccgtcggctttatgtggggaacatcccc
ttcggcatcacagaggagtccatgatggatttcttcaatgctcagatgcgtctgggcggt
ctcactcaggctccaggaaatcccgtccttgctgttcagatcaaccaggacaagaacttt
gccttcctcgagttccgctcagtggatgagacaacccaggccatggcgttcgatggcatc
atcttccagggacagagtctgaagatccgccgtccccatgactaccagcccctgcccggc
atgagcgagaaccccagcgtctacgtgcctggcgtggtgtccacagtggtgcctgattcg
gcccacaagctgttcatcgggggcctgcccaactacctgaatgatgaccaggtgaaggag
ctcctgacatcgtttgggcctctcaaggcctttaacttggtcaaggatagtgccacaggt
ttgtctaagggttatgcgttctgtgagtatgtagatgtcaacctgaacgaccagatcacc
atggagaatcaggccatagcaggactcaacggcatgcagctgggagataaaaaactcctg
gtgcagagagccagcgtgggatccaagaacgccactctgacaagtataaaccagaccccg
gtgacactgcaggtgccgggcctgatgaacagctcaatgacccagatggccggcctgccc
actgaggtgctgtgtctgatgaatatggtggctgtggaggagctggtggatgaagaggaa
tacgaggagatcgtggaggatgtgagggacgagtgcagcaagtacggccaggtcaagagc
atcgagatccccagacctgtggatgggctggaggtccctggcactggcaagatctttgtg
gagttcatgtcagtgtttgactcccagaaggccatgcagggtctgacgggcaggaagttt
gctaaccgggtggtggtgaccaaatactgcgaccctgatgcctaccaccgccgagacttc
tggtag

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