Salmo trutta (river trout): 115177639
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Entry
115177639 CDS
T08542
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B
KO
K03253
translation initiation factor 3 subunit B
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115177639
03012 Translation factors [BR:
stru03012
]
115177639
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115177639
Translation factors [BR:
stru03012
]
Eukaryotic type
Initiation factors
eIF-3
115177639
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_WDR5
Tricorn_2nd
RRM_1
Beta-prop_WDR19_1st
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
115177639
NCBI-ProteinID:
XP_029594435
LinkDB
All DBs
Position
38:31228804..31247346
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AA seq
690 aa
AA seq
DB search
MHDTEDMPADVDFDEEEPSFSDPEDFEDDVDDEELLGDLLREKPQEADGIDSVVVVDNVP
QVGPERLEKLKNVIHKIFSKFGKITNEFYPTVDGPEGLTKGYIFLEYGAPTQALEAVKNA
DGYKLDKQHTFRVNVFTDFDKYMSISDEWETPEKQPFKDFGNMRHWMEDPDCRDQYSVIY
ESGERTAIFNNDAKDPIVSEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQR
FSHQGVSLIDFSPCERYVVTFSPLMDTKEDPQAIIIWDILTGQKKRGFHCESSAHWPIFK
WSHDGKFFARMTQDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGDNIIAFWVPEDKDIP
ARVTLMQLPSRQEIRVRNLFNVVDCKLHWQRQGDYLCVKVDRTPKGTQGVVTNFEIFRMR
EKQVPVDVVEMKGDPESKTAESIIAFAWEPNGSKFAVLHGESPRINASFYHVKNNGKIEL
IKMFDKQQANSIFWSPQGQFMVLAGLRSMNGALAFVDTSDCTMMNMVEHYMASDVEWDPT
GRYLVTSVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPATLLTQDTIKVIKK
DLKKYSKIFEQKDRLSQSKASKELVDKRRSMMEDYRTYREAALLQHDEQKAARLQLRGGV
DTDELDSNTDDWEEETIEFFINEEIIPLGE
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacacggaggatatgccggctgatgtcgacttcgacgaggaggaaccttcgttc
agtgacccagaagacttcgaagatgatgtcgacgacgaggagttgctgggtgacctgctg
cgggagaagcctcaggaggcagacgggatagactctgtggttgtcgtggacaatgtgccc
caggtcggccccgagcgcctggagaaactgaagaacgtcatccacaagatattctccaag
ttcggcaagatcaccaacgagttctacccgacggtagacggacctgaaggactcactaag
gggtacatcttcctggagtatggagctcccactcaggctctggaggcagtgaagaacgct
gacggttacaagctggacaagcagcacaccttcagagtcaatgtgttcaccgacttcgac
aagtacatgagcatcagtgatgagtgggagactcctgagaagcagcccttcaaggacttt
ggtaacatgcgtcactggatggaggaccctgactgtcgtgaccagtacagcgtcatctac
gaatcaggagagaggaccgccatcttcaacaacgacgccaaggatccaatcgtctccgag
gagagggcgcgctggacagagacgtatgtgcgctggtctcccaagggaacctacctggcc
acgttccaccagcgaggcattgcattgtggggcggagagaagttcaagcagatccaacgt
ttcagccaccagggagtgtctctgatcgacttctccccctgcgagaggtacgtggtgacg
ttcagtcccctgatggacactaaggaagacccccaggccatcatcatctgggacattctg
actggccagaaaaagagaggcttccactgtgagagctccgcccactggcctatcttcaag
tggagtcacgatgggaagttctttgccaggatgacccaggacacactgagcatctatgag
actccatccatgggcctgttggacaagaagagtctgaagatcagtggtatcaaggacttc
tcctggtccccaggtgataacatcatagcgttctgggtacccgaggacaaagacatccca
gccagagtgactctgatgcagcttccctccagacaggagatcagagtcaggaacctcttc
aatgtggtcgactgtaaactccactggcagagacagggagactacctctgtgtcaaggtg
gaccggacacctaaaggaactcagggtgtggtgaccaactttgagatcttcaggatgaga
gagaagcaggttcctgttgacgtggtggagatgaagggagacccggaatctaaaactgcg
gagagcatcatagcatttgcgtgggagcctaacggcagtaagtttgccgtcctgcacggt
gaatctcccagaatcaacgcctcgttctaccacgtcaagaacaacgggaagatagaactc
atcaagatgtttgacaagcagcaggccaacagcatcttctggagtcctcagggacagttc
atggtgctggctggactcaggagtatgaacggggccctggcgtttgtggatacctctgac
tgcaccatgatgaacatggttgaacactacatggcttctgatgtagagtgggaccctaca
ggacgatacctggtcacctctgtgtcctggtggagtcacaaggtggacaatgcctactgg
ctgtggaccttccagggtcgtctcctccagaagaacaacaaggaccgcttctgtcagcta
ctctggagacctcggcctgctacccttctcacacaggacaccatcaaggtgatcaagaag
gacctgaagaagtactctaagatctttgagcagaaggatcgtctgagccagtcgaaggcc
tccaaggagctggtggacaagaggaggagcatgatggaggactaccgtacctaccgagag
gctgccctgctacaacacgatgaacagaaagccgcccgcctgcagctccgaggaggagtg
gacactgatgagctggacagtaacacagatgactgggaggaggagaccattgagtttttt
atcaacgaagaaatcattcccctcggagagtag
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