Salmo trutta (river trout): 115177822
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Entry
115177822 CDS
T08542
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115177822
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115177822
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115177822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115177822
NCBI-ProteinID:
XP_029594664
Ensembl:
ENSSTUG00000049071
LinkDB
All DBs
Position
38:complement(12503129..12509893)
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AA seq
427 aa
AA seq
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MAENDVDNELLDYEEDEEPQVAPETATPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKAAVFFGGLSIKKDEDVLKKNCPHIVVGTPGRILALIR
NKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaatgacgttgacaacgagctgttggactatgaagaggatgaggagcctcag
gttgccccggagaccgccacacctgcgggcaagaaggaggtaaagggctcttacgtctcc
atccacagctccggcttccgagacttcctgctcaaaccagagctgctccgtgccattgtc
gactgtggctttgaacatccctctgaagtccaacacgagtgcatcccacaggccatccta
ggcatggacatcctctgccaggccaagtctggtatgggcaagacagctgtgtttgtactg
gccaccctgcagcagattgagcctgtggacgggcaggtgtctgtgctggtgatgtgccac
acacgagagctggccttccagatcagcaaagagtatgagcgcttctccaagtacatgccc
accgtcaaggcagccgtgttcttcgggggcctgtccatcaagaaggacgaggacgtgctg
aagaagaactgcccccacattgtggtgggaacgcccggccgcatcctggccctcatccgc
aacaagaccctcaacctgaagaacgtgaagcactttgtcctggacgagtgtgacaagatg
ctggagcagctggacatgaggcgtgatgttcaggacatcttcaggctcacaccccacgag
aagcagtgcatgatgttcagcgccaccctaagcaaagagatccgccctgtctgccgcaag
ttcatgcaggatcccatggaggtgtttgtggacgatgagaccaagctgacgctgcacggc
ctgcagcagtactactgcaagctgaaggatagcgagaagaaccgcaagctcttcgacctg
ctcgacgtgctcgagttcaaccaggtggtgatcttcgtgaagtctgtgcagcgctgtgtg
gctctgtctcagctgctggtggagcagaacttccctgcaatcgccatccacaggggcatg
gcccaggaggagaggctttcccggtaccagcagttcaaggacttccaaaggcggatcctg
gtggccaccaacctgtttggccgagggatggacattgagcgtgtcaacatcgtcttcaac
tacgacatgcccgaggattctgacacctacctgcacagagtggcccgtgcaggcaggttc
gggacgaaaggtctggccgtgacctttgtgtccgacgagactgacgccaagaccctgaac
gatgtgcaggaccgcttcgaggtcaacgtggcagagctcccagaagagattgacatctcc
acctacattgaacagtccagataa
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