Salmo trutta (river trout): 115177827
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Entry
115177827 CDS
T08542
Name
(RefSeq) perforin-1-like
KO
K07818
perforin 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115177827
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Gene cluster
GFIT
Motif
Pfam:
MACPF
C2
Med2
Motif
Other DBs
NCBI-GeneID:
115177827
NCBI-ProteinID:
XP_029594671
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Position
38:25641417..25659235
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AA seq
562 aa
AA seq
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MDSALTCRTASQSQCDSAPFVPGHNLAGEGFDVVTLKRKGAYLIDLRTYLSPSKTCTLCS
NPLQGNKLQKIPLSVKDWRPYSHCTEDISSHSHASVSNLAQSTTNEISSKWKGGLSNEAK
VSGSVPVGPGIVSVQKDVGASIEMGGSQSDVAIFATTKTKEERHSFFSQNLRCRHYSYRM
SDGPVLSEEFRKDIDRLGSFSETSKAQYRRLIDTYGTHYIRQVDLGGRLTMTTAIHTCQA
SLQRLSTNQVESCLSAGFKVSLGLSVSSTVQSCSKVLDNHDSKTSDSSSFLSHHTKVVGG
SGWPGTLSLNRNDSVGFHSWMRTLKNIPDIIYYSLRPLHLLIPNTVVQQGVKEAVQDYLK
ENALPKSTGELSCGDRYSRRDSNCCLRKVSQGRLVVTVVRAWGLCGDYQWIAGDTEAYAV
VTYGSKNHQTDVIPSNNPVWNATFDMGPFDKDLSLNVVVWDYDPVAEDDNLSDCTFDLEQ
GTHEHWCNNSGEVFYFLYTLTCDPHLTGDKCEKYKPFKATTHKPSTPTVHSNPLYSKSVH
LFSTFSVQSSAVLYLWFFYISL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggactccgccctcacctgtcgtactgccagccaatcccagtgtgactccgcccccttc
gtccccggtcacaacctggcaggggagggtttcgatgtggtgaccctgaaacgtaaaggg
gcctacctgatcgacctgaggacctacctgtcccccagtaaaacctgtacactgtgtagt
aaccccctacagggaaacaagctgcagaaaatacccctgtctgttaaagactggaggccc
tacagccactgtactgaggatatctccagccactctcatgcctctgtcagtaacctggca
cagtccactaccaacgagatctcttcaaaatggaaggggggtttgagtaatgaggcgaag
gtgtctggtagcgtacctgtgggaccggggattgtgagtgtgcagaaggatgtgggtgct
agcatagagatgggagggtcccagtctgatgtagccatctttgccacaaccaagaccaaa
gaggagcgccactctttcttctcacagaatctccgctgccgtcactacagttatcgcatg
tcagatggccctgttctcagcgaagagttccgtaaggacattgatcgtctgggctcattc
tctgaaacctccaaggcccagtaccgccggcttatagacacctatgggactcactacatc
cgccaagttgacctgggaggcaggctgacgatgaccacagcaatacacacctgtcaggct
tcacttcagagactctctacaaaccaggttgaatcctgcttgtccgcaggttttaaggtg
agccttgggttatcagtttcctctaccgtccaaagttgctccaaagttctggacaaccat
gactcgaagacctccgacagctctagcttcctcagccaccacaccaaggtggtgggaggc
tccggttggccggggacgctgtcactcaaccgtaatgactcagtggggttccatagttgg
atgagaaccttgaagaacatcccggacatcatctactattctctgaggcctctgcacctg
cttatacccaacacagttgtacagcaaggagtgaaggaggctgtccaggattacctgaag
gagaatgccctcccgaagagcaccggggaactgtcctgtggggatcgttactctagacgg
gactcaaactgctgcctcaggaaggtctcacagggaagactggtggtgacggtggtcaga
gcctggggactttgtggagactaccaatggatagcgggagacactgaagcgtacgctgtg
gtcacctacggttccaagaaccatcagactgatgtgattccatccaataatcctgtctgg
aatgctacttttgacatgggtccctttgacaaagaccttagtctaaatgtggtggtctgg
gattacgatcctgtggctgaagatgacaacctgagtgactgtaccttcgacctcgagcag
gggacacacgaacactggtgtaacaacagtggggaggtattttatttcctgtacaccctc
acctgtgaccctcacctgaccggggacaagtgtgaaaaatacaaacctttcaaagccaca
acacacaaaccttccacgcccacagtgcactctaatccactctacagtaagagtgtgcat
ctcttttctaccttttctgtccagagttcagccgtcctatacctatggttcttttacatc
tctttataa
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