Salmo trutta (river trout): 115177859
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Entry
115177859 CDS
T08542
Name
(RefSeq) RNA-binding protein 20-like
KO
K24052
RNA-binding protein 20
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115177859
Spliceosome [BR:
stru03041
]
Complex A
Other components
Complex A specific factors
115177859
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
HR1
LCCL
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
115177859
NCBI-ProteinID:
XP_029594712
Ensembl:
ENSSTUG00000036000
LinkDB
All DBs
Position
38:4945143..5025677
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AA seq
1242 aa
AA seq
DB search
MQQAWDKALFEAHIEGVKNGQTGEMSGKSQGGYMGAKTSNEHFQSTSVSDANYNKPQPVG
GGQGQLSGGGGTHQNHQNTQLLLTPASIQLAQLQAQLTFHRLKLAQSAVGGNANSANAAS
ILNQVLANVAMSQPLFNQLRASAMVNNTQAVGGGFHSSALAFQLPPPPPPPPNSALGTLV
GAGFNQNHGNVRLNHYGGGGVSGNQPQQQQANQHGGSDYGKKSGSTYPSDTDRHLQYGFI
GGTSVALSEAGEGQGQYVPIMTQAKSTNQGFQIDFYGQNGQSQQQQAGFGVGNQNDQNKN
AFNEKQWKSPAHMSHTGKGLDMVSNTATVWMGNGQPFRSREELYNPEEPTSDPKLYSGGG
GVTSSFGAGMGGTKEFVGYHKQPLQGGEEILSTGGSVQLQPHQLNDFHAVTPPHLPHQCT
ICEKKVYNLKDWDQHVKGKLHLQNRLLYSEGATITAGAVHYGPAGSSEGCLNNVGVNNSM
AYSSTANQDVSSGANLPAGVMRTYPMSGAGFTQLPPGSKPFPPRKSITGRVVHICNLPEG
SCTENDVINLGLPFGKVTNYILMRSTHQAFVEMAYIEAAQAMVQYYQLTPATINDQKLLI
RMSKRYKELQLKKPGKDVDSIIQDINSLRERDEMQENDHYMPERARSRSPISRSLSPRSH
SPSFTSCSSAHSPQGAPCRGGPERGSWTAKHMRKGDEAREREREREEVPWRNGGTEDDDR
LNGRMQDRRNKPYLKPSDRDRISPRSADERGGGSGEGMRGGNRGGDWYPHPRGSPQGMPP
FPSYRNMDEDSYKTQHVYKSEKPMRPQYQRHEEGRVMSKRRDGGDYHRSRHSESELGEES
LPTRTGEDRRQRGVSPTRGRSKKPTMRHGTEKLEIEITENNGETAEDQRSKEKSVSPQRS
GKHESEKDSEAEEWESGDDTEGECWYPKNMEELVTVDEVGEDDSIIEPDLPELQEHEDVS
ASDLHKDPTEEEEEEEGEAPRSTSTPSPRPCSEKELAQREDTELGRGGGVGGGVDPTPTE
EKDGEISTNPSPTDQSLPQPQPQLQSQPQPHPQLLIPVASEQLSSDLDDFPNPEFKAALE
ETCLEAEVLKSGAPTQELALTNHAGACESSKTQDVIHKMEDVGREVTVMEPDIQQHKAET
PRVIQNSTHVPRPMNLIDIWAPSPSRVQEKIISEHSIPLGVEFIVPSTGFYCKLCGLFYT
SEETAKTSHCRSTVHYRNLQKYLSQLAEESLLGALTDTSATE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggcctgggataaggctctctttgaggctcacatcgaaggtgtcaagaacggc
caaactggtgaaatgtcggggaaaagccaaggaggatatatgggagccaagacgtccaac
gaacacttccagagcaccagcgtgtccgatgccaattataacaagccccagccagtgggt
ggtggccagggccagctgagtggtgggggtgggacccaccagaaccaccagaacacacag
ctcctcttgacacccgccagcatccagctagcccagctccaggcccagctcaccttccac
cgccttaaactggcccagagtgctgtggggggcaacgcaaactctgcaaacgcagccagc
atcctcaatcaggtcctcgccaatgtggccatgtcccagcccctcttcaaccagctccgc
gcctcggccatggtcaataatacccaagcagttggtggtggtttccactccagtgcccta
gccttccaactgcctccaccaccgccgccaccccccaactctgccctggggactttggta
ggggccggattcaaccagaatcatggtaatgtgaggctgaaccattacggaggtgggggt
gtttctgggaaccaaccgcagcagcaacaggccaaccagcatggtggatcagactacggc
aagaaatctggctcaacatacccttcagatacggataggcatctccagtatggcttcata
ggggggacgtcggtggcgttgagtgaagccggagagggacaaggacagtacgtgccgatc
atgactcaggcaaagagtacaaaccaaggctttcagattgacttctatggacaaaacggt
cagagtcaacaacaacaggctgggttcggtgttgggaatcaaaacgatcagaacaagaac
gcttttaatgaaaagcagtggaaaagcccagctcacatgagccacacgggaaaagggttg
gacatggtttccaatactgccacagtatggatggggaatgggcagccattccgttccaga
gaggaactgtacaatccagaggagccaacctctgaccccaagttgtattccggcggtggg
ggagttacttcctcgttcggagcaggcatgggtggcaccaaggagtttgtgggataccac
aagcagcccctgcaggggggagaggagatcctgtctacaggtggttccgtacaactccaa
cctcaccagctgaatgacttccacgctgtgacgccaccccacctgccccaccagtgcacc
atctgtgagaagaaggtctataacctcaaggactgggaccagcacgtgaaaggtaaacta
cacctgcagaaccgcttgctgtactctgaaggtgctacaatcacagccggagccgtccac
tacggtcccgccgggtcgtctgaaggatgcctaaacaacgtcggggtgaataactccatg
gcttactcttccaccgctaatcaagatgtatcatccggagctaacctaccagctggagta
atgaggacctatcccatgtcaggggctggatttacccaactcccacctgggtcaaagcca
tttccacccaggaaatcaatcacaggacgggtcgtccacatctgcaacctccccgagggc
agctgcacagagaatgatgtcatcaacctgggactgcccttcgggaaagtcaccaactac
atcctcatgcgctctacccaccaggcgtttgtggagatggcgtacattgaggcggcccag
gctatggttcaatactaccagctgactccagccacgatcaacgatcagaaactactgatc
aggatgtccaagagatacaaggagcttcagctcaagaaaccaggtaaagacgttgattca
atcatccaggatatcaactctctgagggaaagggacgagatgcaggagaatgatcactac
atgccagagagagcgcggtcccgtagtcctatcagccgctctctgagccctcgctcccac
agccccagctttacctcctgtagttcagcccacagcccgcagggggcaccctgccgagga
ggcccggaacggggctcctggaccgccaaacacatgagaaagggggatgaggccagagaa
cgagagagggaaagggaggaggtgccatggaggaacggaggtacagaggatgacgacagg
ctgaacgggaggatgcaggatcgacggaacaagccgtacctgaaaccctccgaccgagac
cggatcagtcccagatcagcggacgaaagaggaggaggaagtggggaggggatgaggggg
ggaaacagggggggagactggtacccccacccgcggggtagccctcaggggatgcccccc
ttcccttcgtacaggaacatggatgaggactcctacaaaacacaacacgtgtacaagtca
gagaagcccatgaggccacagtaccagagacatgaggaggggagagtcatgtcaaagagg
agggatggaggggactaccacagatccagacactcagagtcagagctgggagaggagtct
ctacccaccaggacaggagaagacagaagacagagaggagtgtccccgacacggggaagg
agcaagaaacccaccatgagacacggaacggagaaactggaaatagagattactgaaaat
aacggagaaaccgctgaggatcagcgatccaaagagaagtctgtttctcctcaacgaagt
ggcaaacatgagagtgaaaaagacagcgaggcggaggagtgggagagtggggacgacacg
gagggtgagtgctggtaccccaagaacatggaggagctggtcacagtggacgaggtagga
gaggacgactccatcatcgaaccggacctccctgagctgcaggagcatgaggacgtgtca
gcctcagacctccacaaggatcctacggaggaggaggaggaggaagagggggaggctcca
cgatcaacctctacccccagtcccaggccctgctctgagaaagagttagcccagagagag
gatactgagttgggcagaggaggtggggtaggtgggggggtggatcctacacctacagag
gagaaagatggggagattagcacaaaccccagccccacagaccagtcactgccacagcca
cagccacagctacagtcacagccacagccacatccacagctactcatcccagtagcctca
gaacagctcagttcagatctggatgatttccccaacccagagttcaaggcagccttggaa
gagacgtgtttggaagctgaagtactgaagagtggagcaccgacgcaggagctggcgcta
accaatcacgctggtgcgtgtgaaagcagcaagacccaggatgtaatacacaagatggag
gacgtggggagggaagtaacggtcatggagccagacatacagcagcacaaggctgagact
cctagagtcatccagaattcaacacatgtcccacgtcctatgaacctgatagacatatgg
gctccctcaccttctagagtgcaggagaagattatcagtgaacacagcatccctctgggg
gtggagttcatcgtgcccagtacggggttctactgtaagctgtgtggcctgttctacacc
agcgaggagacagccaagacctctcactgtcgtagtactgtccactacaggaaccttcag
aagtacctgtctcagctggcagaggagagtctacttggtgcactaactgacacctcagct
acagagtga
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