Salmo trutta (river trout): 115177878
Help
Entry
115177878 CDS
T08542
Name
(RefSeq) xylosyltransferase 1-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
stru00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
stru01100
Metabolic pathways
Module
stru_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115177878
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
115177878
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
stru01003
]
115177878
Enzymes [BR:
stru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
115177878
Glycosyltransferases [BR:
stru01003
]
O-Glycan biosynthesis
Glycosaminoglycan
115177878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Methyltransf_33
Motif
Other DBs
NCBI-GeneID:
115177878
NCBI-ProteinID:
XP_029594734
Ensembl:
ENSSTUG00000047132
UniProt:
A0A674EBW7
LinkDB
All DBs
Position
38:complement(7291618..7399201)
Genome browser
AA seq
969 aa
AA seq
DB search
MVGGSCARRLARRSRSALIAALTVLLVQTLIVWNFSSLDSGEERENGGGGASNMREKRDR
VGGGGYKGSSEYMKREVQLQHHPPQGKGTVRHIQQPDGYYSHRPKEKVRVDSNNENSVPK
DFENIDNSNFGARSQPQRQPPGGANSNKHRERLQEKAHAEQATWKDNAPILSRSSNEVLQ
YGRAVAQNGSLPVGPKAVGAVVGSRNHHSHSLQPQSQGQAQTYPQSQSHTQTQHRHQHPH
QTRKQATAAPLEVVYDQPPKCEISGKEAISALSRAKTKECRQQIAEVYCRHKEGQLMPEK
VTRYCPIEGKANANVAWEEDSSEGPPSAPVRIAFVLVVHGRASRQFQRLFKAIYHTSHYY
YIHIDQRSNYLHRQVQALASQYPNVRVTPWRMATIWGGASLLTMYLRSMADLITMTDWSW
DFFINLSAADYPIRTNSQLVAFLSKYRDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMW
RLGDRKIPEGISVDGGSDWFLLNRPFVEYVINSQDDLVTNMKRFYTYTLLPAESFFHTVL
ENSAHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKPADFHRFQQTARPTFF
ARKFEASVNQEIVNQLDGYLFGPMPQGTPGLQAYWESAFDEADGVATLSDTQLTHYHAFA
RMGLARAAASLQGDPKDDSCRYFPMGHPVSVHLYFLSDQFQGYLVKHHATNLATSKLETL
ETWVMPRKTYKVASPPSTFTRLQFAEIGTEWDAKERMFRNFGGLMGPMDETVGMQRWSKG
PNVTVTVVWIDPTNVIAATYDILIDASAEYTHYRPPLNQPLRPGVWTIRVLHHWSPVAET
RFLISPLAYMKHQPIRQEDTLKLHNGPAKNSYMEQSFHGLNPVLNIPVHLGQVEQAKRNA
ALTGPALEHWVDGLVGAMWEVGAMCSTSMTGGPGTSCPVMQTCAKTPWSSLSPDPKSQLV
PPHADGRIR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggttggcggctcgtgcgctcgcaggttggcccgccgctcgcgttccgccttgatagcg
gctctcaccgtgctgctggtccagacgctaatagtgtggaacttcagtagcctcgattcc
ggggaagaacgggaaaacggcggcggtggcgcgtcgaacatgagggagaagagagaccgg
gtcggcggcggtggctacaaaggcagcagcgagtatatgaagcgcgaggttcagctacag
caccatcctccacaagggaaaggaacggttcgtcacatacagcagccggatggctactat
tcccaccgccccaaggagaaagtcagagtggacagcaacaatgagaactctgtgcccaaa
gactttgagaacatagacaatagtaactttggcgcccgttcgcagccccagcgccagccc
ccagggggcgctaacagtaacaaacacagggagaggctgcaggagaaggcccatgccgaa
caagcaacctggaaggataacgctccgattctcagccggagctccaacgaggtcctccag
tacggacgagccgtagcccagaatggctcacttcctgtgggcccgaaagcggttggagcc
gtggtgggctccaggaaccaccacagccactctttacagccacagagccagggtcaggct
cagacttacccccagtcgcagtcccacacccagactcaacatagacaccaacacccacat
caaaccaggaagcaggcgactgcggctccattggaggtcgtttacgaccagccgcccaag
tgtgagatcagtgggaaggaagccatttcggctctgtccagagccaagaccaaggagtgc
cggcagcagatagctgaagtgtactgcagacacaaggaaggtcaactgatgcctgagaag
gtcacccgctactgtcccatagagggtaaggccaatgccaacgtggcgtgggaggaggac
tcgtcagagggcccgccgtcggcccccgtcaggatagccttcgtcctggtggtccacggc
agagcctcacgacagttccagagacttttcaaggccatctaccacacctcacactactac
tatatacatatagaccagcgctccaactaccttcacagacaggtgcaggccctggcctcc
cagtaccccaacgtgagggtgacgccctggaggatggctaccatctggggcggtgccagc
ctgctcaccatgtacctccgcagcatggcagacctcatcaccatgaccgactggagctgg
gacttcttcatcaacctcagcgctgcagactaccccatcagaaccaacagccagctggtc
gccttcttgtccaagtacagagacatgaacttcatcaagtcccacggcagagacaacgcc
aggtttatccgcaaacaaggtctggaccggcttttctttgagtgcgacacccacatgtgg
cgacttggcgaccgcaaaatcccagaaggcatttctgtggacggcggttctgattggttc
ctgctcaatcgtccgttcgtggagtacgttataaactcccaagacgacctggtcaccaac
atgaagcgcttctatacctacacactgctgcctgccgagtcgttcttccatacggtgctg
gagaacagtgctcactgtgagagcatggtggacaacaacctgcgcatcacgaactggaac
aggaagctgggctgtaagtgtcagtacaaacacatagtggactggtgcggctgctccccc
aacgacttcaaacctgccgactttcaccgtttccagcaaacggcccgtcctacgttcttc
gccaggaagtttgaagccagtgttaaccaggagatagtgaaccaactagatggctacctg
tttggacctatgccccaggggacccctggcctccaggcctactgggagagtgcttttgac
gaggcggacggggtcgcgaccctgagcgacacacagctcacacactaccatgcgtttgct
cgtatgggcctggccagggcggcagcatcgctgcaaggagatcctaaggatgacagctgc
aggtatttccccatgggccacccggtgtcagtgcatctctacttcctgtcggaccagttc
caaggctacctggtcaagcaccacgccactaacctggcaaccagcaagctggagaccctg
gagacctgggtgatgcccaggaagacatacaaggtggcttccccgcccagcaccttcacc
aggctgcagttcgctgagatcggcacagagtgggatgccaaagagcgcatgttccgtaac
ttcggtggtctgatgggtcccatggacgagacagttgggatgcagcggtggtccaagggc
cccaacgtgaccgttaccgtggtgtggatcgaccccaccaacgtcatcgctgccacctac
gatatcctgatcgacgccagcgcagagtacacccactacagaccccccctgaaccagcct
ctcaggcctggggtgtggaccatacgggtgttgcatcactggagccccgtggccgagacg
aggtttctgattagtccgctggcttatatgaagcatcagcctataagacaagaggacacg
ctgaagctccacaacggaccagccaagaacagttatatggagcagagcttccatggcctc
aaccccgtgctcaacatccctgtacacctgggccaggtggagcaggctaagcgcaacgcc
gccctgactggccccgccttggagcactgggtagacggcctggtgggtgcaatgtgggag
gtgggtgcgatgtgttccacctccatgacagggggacctggaacatcctgccccgtcatg
cagacctgcgccaagaccccttggagctcgctcagccccgaccccaagtcccagctggtc
ccgccgcacgccgacgggcgcatcaggtag
DBGET
integrated database retrieval system
