Salmo trutta (river trout): 115177879
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Entry
115177879 CDS
T08542
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115177879
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115177879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115177879
03009 Ribosome biogenesis [BR:
stru03009
]
115177879
04131 Membrane trafficking [BR:
stru04131
]
115177879
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115177879
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115177879
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115177879
Membrane trafficking [BR:
stru04131
]
SNARE
SNARE associated proteins
Others
115177879
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115177879
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115177879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_33
CDC48_2
AAA_2
TIP49
RNA_helicase
AAA_14
NPHP3_N
AAA_28
nSTAND3
ATPase
AAA_17
Mg_chelatase
Vps4_C
Parvo_NS1
ATPase_2
AAA_18
AAA_7
IstB_IS21
ABC_tran
ResIII
AAA_24
DUF815
SLFN-g3_helicase
Sigma54_activat
Viral_helicase1
TsaE
NACHT
NB-ARC
Rad17
KAP_NTPase
Zot
Serglycin
Motif
Other DBs
NCBI-GeneID:
115177879
NCBI-ProteinID:
XP_029594735
Ensembl:
ENSSTUG00000030581
LinkDB
All DBs
Position
38:22226952..22270335
Genome browser
AA seq
804 aa
AA seq
DB search
MPASGGTDPKGEDFSTAILKQKHRPNRLVVDEAHNEDNSIVSLSQAKTEELQLFRGDTVV
LRGRKRRETVCIVLTDDTCPDERVRMNRVTRNNLRVRLGDVISVHACPDVKYGVRIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPLHRGDIFLVRGGMRAVEFKVVETDPAPHCIVAP
DTVIHCEGQPINREDEEESLNDVGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP
AIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKQRTHVIVMAATNRPNSIDPALR
RFGRFDREIDIGIPDSTGRLEILQIHTKNMKLSDDVDLERVSMDAHGHVGSDLAALCSEA
ALQAIRKKMTLIDLEDDTIDAELLNSLAVTNDDFRWALGQSNPSALRETVVEVPNVNWED
IGGLGEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGAGDAGGAAD
RVINQILTEMDGMSNKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDTASRTAILN
ANLRKSPIARDVDLPYLSGITQGFSGADLTEICQRACKLAIREAIEAEIKAERQRQTHPG
TAMDEDCDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSGSQ
SGGQGSGSGSGGQFRDEVEDDLYQ
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcctctggagggacagatcctaagggggaggatttctccactgctatcctgaaa
cagaaacacagacccaacagactggtggtggatgaagcccacaatgaagacaacagcatc
gtcagcctctcacaggcgaagacagaggagctgcagttgttccgtggcgacacggtggtc
ctgcgggggaggaagcgccgtgagacggtgtgtatcgtgttgacagacgacacctgtcca
gacgaacgcgtccgcatgaaccgcgtcacacgcaacaacctgagggtacgcctcggtgat
gtcatcagtgtccatgcatgcccagatgtgaagtacggcgtgcgtatccatgtcctgccg
atagatgacaccattgaagggttaacgggaaacctgtttgacgtcttcctgaaaccatat
ttcttggaagcctatcggcccttacacagaggcgacatcttccttgtgcgagggggcatg
cgggcagtggagttcaaggtggtggagacagaccccgccccccactgcattgtcgccccg
gataccgtcatccactgcgagggacagccaatcaacagagaggacgaggaggagagtctg
aatgacgtaggctatgatgacattggaggttgtcgtaaacagttagctcaaatcaaagaa
atggtggagcttcccctcagacatcctggactcttcaaggctataggagtcaagcctccc
aggggtattctgctgtatggacctccaggtacagggaagacactggttgcccgggccgtc
gccaacgagactggagcattcttcttcctcatcaatggtcctgagatcatgagtaagatg
gccggggagtcagagagcaacctgaggaaagccttcgaggaggcagagaaaaactctccc
gccattatcttcatagatgaactggattctatcgctcctaagagagagaagacccatggg
gaggtggagaggcgaatcgtatcacagctcctcaccctgatggatggactgaagcagaga
actcacgttatcgtcatggcagccaccaacagacccaacagcatcgaccctgccctgaga
cgcttcggcaggtttgacagagagatagacatcggcatcccagactccactggtagactg
gagatactgcagattcacaccaagaacatgaaactatctgatgacgtggacctggagagg
gtttccatggatgcgcatggccatgtggggtcagacctggcagctctgtgttctgaggcg
gctctacaggccatcaggaagaagatgaccctgattgacctggaggacgacaccattgat
gctgaactgctcaactcactggcagttaccaacgatgacttcaggtgggcgttggggcag
agtaacccgtcagctctgagggaaacagtagtggaggttcctaatgttaactgggaggat
ataggaggactgggagaggtcaagagagaactgcaggaactagtacagtatccggtggag
tacccagataagttcctgaagttcggtatgaccccgtcacgaggcgtgctattctatgga
cctccaggctgtggaaagaccctgctagccaaggcgatcgctaatgagtgccaggccaac
ttcatctccatcaagggacctgagctgctcaccatgtggtttggcgagtcagaggctaat
gtcagggacgtcttcgacaaggccagacaggcggccccctgcatcctgttctttgacgaa
ctggactccatcgccaagtccagagggggcggagccggggacgcagggggcgcggccgac
agggtcatcaaccagatcctcacggagatggacggaatgtccaacaagaagaacgtcttt
attataggagctaccaacagacctgatataatagactctgctatcctccgtccagggagg
ctggatcagcttatctacatccctctaccagacacagcctcccgtaccgccatcctcaac
gccaacctacgcaagtcccccatcgccagagatgtagacctgccctacctgtctggtatc
acccagggtttcagtggggcagacctgacagagatctgccagagggcctgtaagctggcc
atcagagaggccatagaggctgagatcaaagcagagcgccagaggcagacccacccaggc
accgccatggatgaggactgtgaccctgttccagagatcaggaaggatcactttgaggag
gccatgaggttcgcccggcgctccgtcagcgacaacgatatcaggaagtatgagatgttc
gcccagacactacagcagagcagaggctttgggaacttcaggttcccctctggctctcag
tccggaggtcaagggtcggggtcggggtcagggggacagttcagagacgaggtagaggac
gacctctaccagtga
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